Evidence map›Paper›PMID 28395340›Full record

ArticleBiology of reproduction2017

Testicular adenosine to inosine RNA editing in the mouse is mediated by ADARB1.

Elizabeth M Snyder, Konstantin Licht, Robert E Braun

Open access · bronzeAbstract read
In one paragraph

Article in Biology of reproduction, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Sex-Dependent RNA Editing andFrontiers in cell and developmental biology · 2020
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Elizabeth M SnyderThe Jackson Laboratory, Bar Harbor, Maine, USA.
Konstantin LichtDepartment of Chromosome Biology, Max F. Perutz Laboratories, University of Vienna, Vienna, Austria.
Robert E BraunThe Jackson Laboratory, Bar Harbor, Maine, USA.
Jackson Laboratory · USMax Perutz Labs · AT

Funding

RNA Editing in the Neonatal and Adult TestisF32HD072628 · NICHD · JACKSON LABORATORY · PI SNYDER, ELIZABETH M, · 2012 to 2014
$156k
NICHD NIH HHS F32 HD072628
6 · The paper itself

Abstract

Adenosine to inosine (A-to-I) RNA editing occurs in a wide range of tissues and cell types and can be catalyzed by one of the two adenosine deaminase acting on double-stranded RNA enzymes, ADAR and ADARB1. Editing can impact both coding and noncoding regions of RNA, and in higher organisms has been proposed to function in adaptive evolution. Neither the prevalence of A-to-I editing nor the role of either ADAR or ADARB1 has been examined in the context of germ cell development in mammals. Computational analysis of whole testis and cell-type specific RNA-sequencing data followed by molecular confirmation demonstrated that A-to-I RNA editing occurs in both the germ line and in somatic Sertoli cells in two targets, Cog3 and Rpa1. Expression analysis demonstrated both Adar and Adarb1 were expressed in both Sertoli cells and in a cell-type dependent manner during germ cell development. Conditional ablation of Adar did not impact testicular RNA editing in either germ cells or Sertoli cells. Additionally, Adar ablation in either cell type did not have gross impacts on germ cell development or male fertility. In contrast, global Adarb1 knockout animals demonstrated a complete loss of A-to-I RNA editing in spite of normal germ cell development. Taken together, these observations demonstrate ADARB1 mediates A-to-I RNA editing in the testis and these editing events are dispensable for male fertility in an inbred mouse strain in the lab.

Indexed as

RNA EditingSpermatogenesisAdenosine DeaminaseAnimalsMaleMiceRNA-Binding ProteinsTestisADARB1 protein, mouseAdenosine DeaminaseRNA-Binding ProteinsADARadenosine deaminasemeiosisRNA editingRNA modificationSertoli cellsspermatidsspermatocytesspermatogenesis

Identifiers

PMID28395340
PMCPMC6279061
OpenAlexW2896341681

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.