Evidence map›Paper›PMID 28394337›Full record

ArticleNature methods2017

DeActs: genetically encoded tools for perturbing the actin cytoskeleton in single cells.

Martin Harterink, Marta Esteves da Silva, Lena Will, Julia Turan, Adiljan Ibrahim, Alexander E Lang, Eljo Y van Battum, R Jeroen Pasterkamp, Lukas C Kapitein, Dmitri Kudryashov and 3 more

Open access · greenAbstract read
In one paragraph

Article in Nature methods, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 75 citations in OpenAlex.

  1. Actin disassembly triggers CNS myelin compaction and wrapping.bioRxiv : the preprint server for biology · 2026
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  15. Optical Control of G-Actin with a Photoswitchable Latrunculin.Journal of the American Chemical Society · 2024
    Article
  16. SRF transcriptionally regulates the oligodendrocyte cytoskeleton during CNS myelination.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  17. Article
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  20. Turn-On Protein Switches for Controlling Actin Binding in Cells.bioRxiv : the preprint server for biology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Martin HarterinkCell Biology, Department of Biology, Faculty of Science, Utrecht University, Utrecht, the Netherlands.
Marta Esteves da SilvaCell Biology, Department of Biology, Faculty of Science, Utrecht University, Utrecht, the Netherlands.
Lena WillCell Biology, Department of Biology, Faculty of Science, Utrecht University, Utrecht, the Netherlands.
Julia TuranDepartment of Neurobiology, Stanford University School of Medicine, Stanford, California, USA.
Adiljan IbrahimDepartment of Neurobiology, Stanford University School of Medicine, Stanford, California, USA.
Alexander E LangInstitute for Experimental and Clinical Pharmacology and Toxicology, Albert-Ludwigs University of Freiburg, Freiburg, Germany.
Eljo Y van BattumDepartment of Translational Neuroscience, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht, the Netherlands.
R Jeroen PasterkampDepartment of Translational Neuroscience, Brain Center Rudolf Magnus, University Medical Center Utrecht, Utrecht, the Netherlands.ORCID http://orcid.org/0000-0003-1631-6440
Lukas C KapiteinCell Biology, Department of Biology, Faculty of Science, Utrecht University, Utrecht, the Netherlands.
Dmitri KudryashovDepartment of Chemistry and Biochemistry, The Ohio State University, Columbus, Ohio, USA.
Ben A BarresDepartment of Neurobiology, Stanford University School of Medicine, Stanford, California, USA.
Casper C HoogenraadCell Biology, Department of Biology, Faculty of Science, Utrecht University, Utrecht, the Netherlands.
J Bradley ZucheroDepartment of Neurobiology, Stanford University School of Medicine, Stanford, California, USA.ORCID http://orcid.org/0000-0002-4706-2538
Utrecht University · NLStanford University · USUniversity Medical Center Utrecht · NLThe Ohio State University · USUniversity of Freiburg · DE

Funding

VECTOR COREP30NS069375 · NINDS · STANFORD UNIVERSITY · PI STEINBERG, GARY K · 2011 to 2019
$6.3M
OPTIC NERVE MYELINATIONR01EY010257 · NEI · STANFORD UNIVERSITY · PI BARRES, BEN A · 1999 to 2012
$4.0M
Name Molecular mechanisms of bacterial toxins targeting actin cytoskeletonR01GM114666 · NIGMS · OHIO STATE UNIVERSITY · PI KUDRYASHOV, DMITRI · 2015 to 2025
$3.8M
NEI NIH HHS R01 EY010257NIGMS NIH HHS R01 GM114666NINDS NIH HHS P30 NS069375
6 · The paper itself

Abstract

The actin cytoskeleton is essential for many fundamental biological processes, but tools for directly manipulating actin dynamics are limited to cell-permeable drugs that preclude single-cell perturbations. Here we describe DeActs, genetically encoded actin-modifying polypeptides, which effectively induce actin disassembly in eukaryotic cells. We demonstrate that DeActs are universal tools for studying the actin cytoskeleton in single cells in culture, tissues, and multicellular organisms including various neurodevelopmental model systems.

Indexed as

Actin CytoskeletonActinsADP Ribose TransferasesAnimalsFibroblastsGelsolinGreen Fluorescent ProteinsHeLa CellsHumansPeptidesRatsRecombinant Fusion ProteinsTransfectionVirulence FactorsActinsADP Ribose TransferasesGelsolinGreen Fluorescent ProteinsPeptidesRecombinant Fusion ProteinsspvB protein, Salmonella enterica virulence plasmidVirulence Factors

Identifiers

PMID28394337
PMCPMC5419720
OpenAlexW2606022871

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.