Evidence map›Paper›PMID 28393904›Full record

ArticleScientific reports2017

Transcriptomic changes in an animal-bacterial symbiosis under modeled microgravity conditions.

Giorgio Casaburi, Irina Goncharenko-Foster, Alexandrea A Duscher, Jamie S Foster

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
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  10. Critical symbiont signals drive both local and systemic changes in diel and developmental host gene expression.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Giorgio CasaburiDepartment of Microbiology and Cell Science, University of Florida, Space Life Science Lab, Merritt Island, FL, USA.
Irina Goncharenko-FosterDepartment of Microbiology and Cell Science, University of Florida, Space Life Science Lab, Merritt Island, FL, USA.
Alexandrea A DuscherDepartment of Microbiology and Cell Science, University of Florida, Space Life Science Lab, Merritt Island, FL, USA.
Jamie S FosterDepartment of Microbiology and Cell Science, University of Florida, Space Life Science Lab, Merritt Island, FL, USA.
University of Florida · USKennedy Space Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Spaceflight imposes numerous adaptive challenges for terrestrial life. The reduction in gravity, or microgravity, represents a novel environment that can disrupt homeostasis of many physiological processes. Additionally, it is becoming increasingly clear that an organism's microbiome is critical for host health and examining its resiliency in microgravity represents a new frontier for space biology research. In this study, we examine the impact of microgravity on the interactions between the squid Euprymna scolopes and its beneficial symbiont Vibrio fischeri, which form a highly specific binary mutualism. First, animals inoculated with V. fischeri aboard the space shuttle showed effective colonization of the host light organ, the site of the symbiosis, during space flight. Second, RNA-Seq analysis of squid exposed to modeled microgravity conditions exhibited extensive differential gene expression in the presence and absence of the symbiotic partner. Transcriptomic analyses revealed in the absence of the symbiont during modeled microgravity there was an enrichment of genes and pathways associated with the innate immune and oxidative stress response. The results suggest that V. fischeri may help modulate the host stress responses under modeled microgravity. This study provides a window into the adaptive responses that the host animal and its symbiont use during modeled microgravity.

Indexed as

Host-Pathogen InteractionsMicrobiotaSymbiosisTranscriptomeWeightlessnessAliivibrio fischeriAnimalsComputational BiologyDecapodiformesGene Expression ProfilingGene OntologyImmunity, InnateOxidative StressSpace Flight

Identifiers

PMID28393904
PMCPMC5385879
OpenAlexW2607505169

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.