Evidence map›Paper›PMID 28391358›Full record

ArticleCancer immunology, immunotherapy : CII2017

Genetic evolution of uveal melanoma guides the development of an inflammatory microenvironment.

Gülçin Gezgin, Mehmet Dogrusöz, T Huibertus van Essen, Wilhelmina G M Kroes, Gregorius P M Luyten, Pieter A van der Velden, Vonn Walter, Robert M Verdijk, Thorbald van Hall, Sjoerd H van der Burg and 1 more

Registry-linked trialOpen access · hybridAbstract read
In one paragraph

Article in Cancer immunology, immunotherapy : CII, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05047276 (Phase I/II Study of AloCelyvir in Patients With Metastatic Uveal Melanoma), which is not on this map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
9.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05047276 phase1 / phase2unknown statusnot on this mapstarted 2021, after this paper: background citation

Phase I/II Study of AloCelyvir in Patients With Metastatic Uveal Melanoma

TypeinterventionalSponsorJosé María Piulats RodríguezRan2021 to 2024Enrolled16ConditionsUveal Melanoma, MetastaticArmsAloCelyvir
3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 111 citations in OpenAlex.

  1. Trial
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  10. An overview of BAP1 biological functions and current therapeutics.Biochimica et biophysica acta. Reviews on cancer · 2025
    Review
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  16. Review
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10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Gülçin GezginDepartment of Ophthalmology, Leiden University Medical Center, PO Box 9600, 2300 RC, Leiden, The Netherlands.
Mehmet DogrusözDepartment of Ophthalmology, Leiden University Medical Center, PO Box 9600, 2300 RC, Leiden, The Netherlands.
T Huibertus van EssenDepartment of Ophthalmology, Leiden University Medical Center, PO Box 9600, 2300 RC, Leiden, The Netherlands.
Wilhelmina G M KroesDepartment of Clinical Genetics, Leiden University Medical Center, Leiden, The Netherlands.
Gregorius P M LuytenDepartment of Ophthalmology, Leiden University Medical Center, PO Box 9600, 2300 RC, Leiden, The Netherlands.
Pieter A van der VeldenDepartment of Ophthalmology, Leiden University Medical Center, PO Box 9600, 2300 RC, Leiden, The Netherlands.
Vonn WalterDepartment of Biochemistry, Penn State Milton S. Hershey Medical Center, Hershey, PA, USA.
Robert M VerdijkDepartment of Pathology, Section Ophthalmic Pathology, Erasmus MC University Medical Center, Rotterdam, The Netherlands.
Thorbald van HallDepartment of Clinical Oncology, Leiden University Medical Center, Leiden, The Netherlands.
Sjoerd H van der BurgDepartment of Clinical Oncology, Leiden University Medical Center, Leiden, The Netherlands.
Martine J JagerDepartment of Ophthalmology, Leiden University Medical Center, PO Box 9600, 2300 RC, Leiden, The Netherlands. M.J.Jager@lumc.nl.
Leiden University Medical Center · NLErasmus MC · NLPenn State Milton S. Hershey Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Uveal melanoma (UM) is characterized by a number of genetic aberrations that follow a certain chronology and are tightly linked to tumor recurrence and survival. Loss of chromosome 3, bi-allelic loss of BAP1 expression, and gain in chromosome 8q have been associated with metastasis formation and death, while loss of chromosome 3 has been associated with the influx of macrophages and T cells. We used a set of genetically-classified UM to study immune infiltration in the context of their genetic evolution. We show in two independent cohorts that lack of BAP1 expression is associated with an increased density of CD3

Indexed as

Chromosome AberrationsEvolution, MolecularChromosomes, Human, Pair 3Chromosomes, Human, Pair 8Cohort StudiesCytokinesDNA Mutational AnalysisDNA, NeoplasmFemaleGene Expression Regulation, NeoplasticHumansImmunohistochemistryInflammationLymphocytes, Tumor-InfiltratingMacrophagesMaleBAP1 protein, humanCytokinesDNA, NeoplasmTumor Suppressor ProteinsUbiquitin ThiolesteraseBAP1ChromosomeInfiltrationLymphocytesMacrophagesT cells

Identifiers

PMID28391358
PMCPMC5489616
OpenAlexW2605362070

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.