Evidence map›Paper›PMID 28391009›Full record

ReviewGenomics, proteomics & bioinformatics2017

The Promise of Pharmacogenomics in Reducing Toxicity During Acute Lymphoblastic Leukemia Maintenance Treatment.

Shoshana Rudin, Marcus Marable, R Stephanie Huang

Open access · goldAbstract readReview
In one paragraph

Review in Genomics, proteomics & bioinformatics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 60 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Association ofCurrent issues in molecular biology · 2024
    Article
  5. Article
  6. Review
  7. Article
  8. The influence ofHGG advances · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Journal of personalized medicine · 2021
    Article
  16. Review
  17. Article
  18. Integrating evolutionary dynamics into cancer therapy.Nature reviews. Clinical oncology · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Shoshana RudinBiological Sciences Division, University of Chicago, Chicago, IL 60637, USA.
Marcus MarableBiological Sciences Division, University of Chicago, Chicago, IL 60637, USA.
R Stephanie HuangDepartment of Medicine, University of Chicago, Chicago, IL 60637, USA. Electronic address: rhuang@medicine.bsd.uchicago.edu.
University of Chicago · US

Funding

VIRAL ONCOLOGY CORE FACILITYP30CA014599 · NCI · UNIVERSITY OF CHICAGO · PI CHIEN-MIN KAO · 1985 to 2026
$122.1M
Whole GenomeU01GM061393 · NIGMS · UNIVERSITY OF CHICAGO · PI COX, NANCY J · 2000 to 2014
$39.0M
TRANSLATIONAL RESEARCH UNIVERSITY OF CHICAGO: CLINICAL TRIALSUL1RR024999 · NCRR · UNIVERSITY OF CHICAGO · PI SOLWAY, JULIAN · 2007 to 2011
$25.3M
Variation in Hormone and xenobiotic metabolizing enzyme genes and breast cancerP50CA125183 · NCI · UNIVERSITY OF CHICAGO · PI COX, NANCY · 2006 to 2010
$11.3M
Genome-wide interrogation of genetic signatures for glucocorticoid sensitivityK08GM089941 · NIGMS · UNIVERSITY OF CHICAGO · PI HUANG, RONG STEPHANIE · 2010 to 2014
$498k
Incorporation of microRNA expression in pharmacogenetic prediction modelsR21CA139278 · NCI · UNIVERSITY OF CHICAGO · PI DOLAN, MARY EILEEN, HUANG, RONG STEPHANIE · 2009 to 2010
$378k
NCI NIH HHS P30 CA014599NCI NIH HHS P50 CA125183NCI NIH HHS R21 CA139278NCRR NIH HHS UL1 RR024999NIGMS NIH HHS K08 GM089941NIGMS NIH HHS U01 GM061393
6 · The paper itself

Abstract

Pediatric acute lymphoblastic leukemia (ALL) affects a substantial number of children every year and requires a long and rigorous course of chemotherapy treatments in three stages, with the longest phase, the maintenance phase, lasting 2-3years. While the primary drugs used in the maintenance phase, 6-mercaptopurine (6-MP) and methotrexate (MTX), are necessary for decreasing risk of relapse, they also have potentially serious toxicities, including myelosuppression, which may be life-threatening, and gastrointestinal toxicity. For both drugs, pharmacogenomic factors have been identified that could explain a large amount of the variance in toxicity between patients, and may serve as effective predictors of toxicity during the maintenance phase of ALL treatment. 6-MP toxicity is associated with polymorphisms in the genes encoding thiopurine methyltransferase (TPMT), nudix hydrolase 15 (NUDT15), and potentially inosine triphosphatase (ITPA), which vary between ethnic groups. Moreover, MTX toxicity is associated with polymorphisms in genes encoding solute carrier organic anion transporter family member 1B1 (SLCO1B1) and dihydrofolate reductase (DHFR). Additional polymorphisms potentially associated with toxicities for MTX have also been identified, including those in the genes encoding solute carrier family 19 member 1 (SLC19A1) and thymidylate synthetase (TYMS), but their contributions have not yet been well quantified. It is clear that pharmacogenomics should be incorporated as a dosage-calibrating tool in pediatric ALL treatment in order to predict and minimize the occurrence of serious toxicities for these patients.

Indexed as

Maintenance ChemotherapyPharmacogeneticsAdolescentAntineoplastic AgentsChildChild, PreschoolFemaleHumansMaleMercaptopurineMethotrexatePrecursor Cell Lymphoblastic Leukemia-LymphomaAntineoplastic AgentsMercaptopurineMethotrexate6-MercaptopurineAcute lymphoblastic leukemiaMaintenance therapyMethotrexatePharmacogenomics

Identifiers

PMID28391009
PMCPMC5414888
OpenAlexW2605343642

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.