Evidence map›Paper›PMID 28390424›Full record

ArticleBMC medical genomics2017

GRMD cardiac and skeletal muscle metabolism gene profiles are distinct.

Larry W Markham, Candice L Brinkmeyer-Langford, Jonathan H Soslow, Manisha Gupte, Douglas B Sawyer, Joe N Kornegay, Cristi L Galindo

Abstract read
In one paragraph

Article in BMC medical genomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Larry W MarkhamDepartment of Medicine, Division of Cardiovascular Medicine, Vanderbilt University Medical Center, 2200 Pierce Avenue, 359A Preston Research Building, Nashville, TN, 37232, USA.
Candice L Brinkmeyer-LangfordDepartment of Veterinary Integrative Biosciences, Texas A&M University, College Station, TX, USA.
Jonathan H SoslowDepartment of Pediatrics, Division of Pediatric Cardiology, Vanderbilt University Medical Center, Nashville, USA.
Manisha GupteDepartment of Medicine, Division of Cardiovascular Medicine, Vanderbilt University Medical Center, 2200 Pierce Avenue, 359A Preston Research Building, Nashville, TN, 37232, USA.
Douglas B SawyerDepartment of Medicine, Division of Cardiovascular Medicine, Vanderbilt University Medical Center, 2200 Pierce Avenue, 359A Preston Research Building, Nashville, TN, 37232, USA.
Joe N KornegayDepartment of Veterinary Integrative Biosciences, Texas A&M University, College Station, TX, USA.
Cristi L GalindoDepartment of Medicine, Division of Cardiovascular Medicine, Vanderbilt University Medical Center, 2200 Pierce Avenue, 359A Preston Research Building, Nashville, TN, 37232, USA. Cristi.L.Galindo@Vanderbilt.edu.

Funding

VANDERBILT UNIVERSITY CTSA FOR PEDIATRIC RESEARCHUL1RR024975 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$45.7M
The Vanderbilt Institute for Clinical and Translational Research (VICTR)UL1TR000445 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BERNARD, GORDON RAPHAEL · 2012 to 2016
$41.4M
Optimizing Cardiovascular Stem Cells for Cardiac Repair and RegenerationU01HL100398 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI HATZOPOULOS, ANTONIS · 2009 to 2015
$8.0M
Quantitative Assessment of Cardiac Disease in Duchenne Muscular DystrophyK23HL123938 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI SOSLOW, JONATHAN HARVEY · 2014 to 2018
$829k
The anti-fibrotic effects of neuregulin in the heartK01HL121045 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI GALINDO, CRISTI LARA · 2014 to 2018
$747k
NCATS NIH HHS UL1 TR000445NCRR NIH HHS UL1 RR024975NHLBI NIH HHS K01 HL121045NHLBI NIH HHS K23 HL123938NHLBI NIH HHS U01 HL100398
6 · The paper itself

Abstract

backgroundDuchenne muscular dystrophy (DMD) is caused by mutations in the DMD gene, which codes for the dystrophin protein. While progress has been made in defining the molecular basis and pathogenesis of DMD, major gaps remain in understanding mechanisms that contribute to the marked delay in cardiac compared to skeletal muscle dysfunction.

methodsTo address this question, we analyzed cardiac and skeletal muscle tissue microarrays from golden retriever muscular dystrophy (GRMD) dogs, a genetically and clinically homologous model for DMD. A total of 15 dogs, 3 each GRMD and controls at 6 and 12 months plus 3 older (47-93 months) GRMD dogs, were assessed.

resultsGRMD dogs exhibited tissue- and age-specific transcriptional profiles and enriched functions in skeletal but not cardiac muscle, consistent with a "metabolic crisis" seen with DMD microarray studies. Most notably, dozens of energy production-associated molecules, including all of the TCA cycle enzymes and multiple electron transport components, were down regulated. Glycolytic and glycolysis shunt pathway-associated enzymes, such as those of the anabolic pentose phosphate pathway, were also altered, in keeping with gene expression in other forms of muscle atrophy. On the other hand, GRMD cardiac muscle genes were enriched in nucleotide metabolism and pathways that are critical for neuromuscular junction maintenance, synaptic function and conduction.

conclusionsThese findings suggest differential metabolic dysfunction may contribute to distinct pathological phenotypes in skeletal and cardiac muscle.

Indexed as

AnimalsDog DiseasesDogsGene Expression ProfilingGlycolysisMuscle, SkeletalMuscular Dystrophy, DuchenneMutationMyocardiumOligonucleotide Array Sequence AnalysisOrgan SpecificityPhenotypeBDNFCardiacDuchenneDystrophinMetabolismMuscular dystrophy

Identifiers

PMID28390424
PMCPMC5385041

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.