Evidence map›Paper›PMID 28390422›Full record

ArticleMicrobiome2017

High-fat feeding rather than obesity drives taxonomical and functional changes in the gut microbiota in mice.

Liang Xiao, Si Brask Sonne, Qiang Feng, Ning Chen, Zhongkui Xia, Xiaoping Li, Zhiwei Fang, Dongya Zhang, Even Fjære, Lisa Kolden Midtbø and 18 more

Open access · goldAbstract read
In one paragraph

Article in Microbiome, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed, 2 pooled it
6.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 2 syntheses or guidelines pooled it, 158 citations in OpenAlex.

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23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 6 institutions in 4 countries.

Liang XiaoBGI-Shenzhen, Shenzhen, 518083, China.
Si Brask SonneLaboratory of Genomics and Molecular Biomedicine, Department of Biology, University of Copenhagen, DK-2100, Copenhagen, Denmark.
Qiang FengBGI-Shenzhen, Shenzhen, 518083, China.
Ning ChenBGI-Shenzhen, Shenzhen, 518083, China.
Zhongkui XiaBGI-Shenzhen, Shenzhen, 518083, China.
Xiaoping LiBGI-Shenzhen, Shenzhen, 518083, China.
Zhiwei FangBGI-Shenzhen, Shenzhen, 518083, China.
Dongya ZhangBGI-Shenzhen, Shenzhen, 518083, China.
Even FjæreLaboratory of Genomics and Molecular Biomedicine, Department of Biology, University of Copenhagen, DK-2100, Copenhagen, Denmark.
Lisa Kolden MidtbøLaboratory of Genomics and Molecular Biomedicine, Department of Biology, University of Copenhagen, DK-2100, Copenhagen, Denmark.
Muriel DerrienLaboratory of Microbiology, Wageningen University, 6701 AK, Wageningen, The Netherlands.
Floor HugenholtzLaboratory of Microbiology, Wageningen University, 6701 AK, Wageningen, The Netherlands.
Longqing TangBGI-Shenzhen, Shenzhen, 518083, China.
Junhua LiBGI-Shenzhen, Shenzhen, 518083, China.
Jianfeng ZhangBGI-Shenzhen, Shenzhen, 518083, China.
Chuan LiuBGI-Shenzhen, Shenzhen, 518083, China.
Qin HaoLaboratory of Genomics and Molecular Biomedicine, Department of Biology, University of Copenhagen, DK-2100, Copenhagen, Denmark.
Ulla Birgitte VogelNational Research Centre for the Working Environment, DK-2100, Copenhagen, Denmark.
Alicja MortensenNational Food Institute, Technical University of Denmark, DK-2800, Kongens Lyngby, Denmark.
Michiel KleerebezemLaboratory of Microbiology, Wageningen University, 6701 AK, Wageningen, The Netherlands.
Tine Rask LichtNational Food Institute, Technical University of Denmark, DK-2800, Kongens Lyngby, Denmark.
Huanming YangBGI-Shenzhen, Shenzhen, 518083, China.
Jian WangBGI-Shenzhen, Shenzhen, 518083, China.
Yingrui LiBGI-Shenzhen, Shenzhen, 518083, China.
Manimozhiyan ArumugamBGI-Shenzhen, Shenzhen, 518083, China.
Jun WangBGI-Shenzhen, Shenzhen, 518083, China.
Lise MadsenBGI-Shenzhen, Shenzhen, 518083, China.
Karsten KristiansenBGI-Shenzhen, Shenzhen, 518083, China. kk@bio.ku.dk.ORCID 0000-0002-6024-0917
BGI Group (China) · CNUniversity of Copenhagen · DKTechnical University of Denmark · DKWageningen University & Research · NLDanone (France) · FRNational Research Centre for the Working Environment · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIt is well known that the microbiota of high-fat (HF) diet-induced obese mice differs from that of lean mice, but to what extent, this difference reflects the obese state or the diet is unclear. To dissociate changes in the gut microbiota associated with high HF feeding from those associated with obesity, we took advantage of the different susceptibility of C57BL/6JBomTac (BL6) and 129S6/SvEvTac (Sv129) mice to diet-induced obesity and of their different responses to inhibition of cyclooxygenase (COX) activity, where inhibition of COX activity in BL6 mice prevents HF diet-induced obesity, but in Sv129 mice accentuates obesity.

resultsUsing HiSeq-based whole genome sequencing, we identified taxonomic and functional differences in the gut microbiota of the two mouse strains fed regular low-fat or HF diets with or without supplementation with the COX-inhibitor, indomethacin. HF feeding rather than obesity development led to distinct changes in the gut microbiota. We observed a robust increase in alpha diversity, gene count, abundance of genera known to be butyrate producers, and abundance of genes involved in butyrate production in Sv129 mice compared to BL6 mice fed either a LF or a HF diet. Conversely, the abundance of genes involved in propionate metabolism, associated with increased energy harvest, was higher in BL6 mice than Sv129 mice.

conclusionsThe changes in the composition of the gut microbiota were predominantly driven by high-fat feeding rather than reflecting the obese state of the mice. Differences in the abundance of butyrate and propionate producing bacteria in the gut may at least in part contribute to the observed differences in obesity propensity in Sv129 and BL6 mice.

Indexed as

Diet, High-FatGastrointestinal MicrobiomeAnimalsBacillotaBacteroidetesButyratesCyclooxygenase InhibitorsDietary FatsGenome, BacterialIndomethacinLipid MetabolismMaleMiceMice, Inbred C57BLObesityPropionatesButyratesCyclooxygenase InhibitorsDietary FatsIndomethacinPropionatesProstaglandin-Endoperoxide Synthases129S6/Sv miceC57BL/6J miceHigh-fat feedingIndomethacinMicrobiomeMicrobiotaObesity

Identifiers

PMID28390422
PMCPMC5385073
OpenAlexW2605349659

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.