Evidence map›Paper›PMID 28389564›Full record

ReviewThe Journal of biological chemistry2017

Natural product discovery from the human microbiome.

Matthew R Wilson, Li Zha, Emily P Balskus

Open access · hybridAbstract readReview
In one paragraph

Review in The Journal of biological chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 75 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Discovering functional small molecules in the gut microbiome.Current opinion in chemical biology · 2023
    Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Review
  15. Article
  16. Review
  17. A Metabolite ofJournal of the American Chemical Society · 2021
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Matthew R WilsonFrom the Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138.
Li ZhaFrom the Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138.
Emily P BalskusFrom the Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138 balskus@chemistry.harvard.edu.
Harvard University · US

Funding

Understanding the Mechanism of a Gut Microbial Genotoxin Involved in Colorectal CarcinogenesisR01CA208834 · NCI · HARVARD UNIVERSITY · PI BALSKUS, EMILY PATRICIA · 2016 to 2025
$3.7M
NCI NIH HHS R01 CA208834
6 · The paper itself

Abstract

Human-associated microorganisms have the potential to biosynthesize numerous secondary metabolites that may mediate important host-microbe and microbe-microbe interactions. However, there is currently a limited understanding of microbiome-derived natural products. A variety of complementary discovery approaches have begun to illuminate this microbial "dark matter," which will in turn allow detailed mechanistic studies of the effects of these molecules on microbiome and host. Herein, we review recent efforts to uncover microbiome-derived natural products, describe the key approaches that were used to identify and characterize these metabolites, discuss potential functional roles of these molecules, and highlight challenges related to this emerging research area.

Indexed as

Anti-Bacterial AgentsAntifungal AgentsAntineoplastic AgentsGastrointestinal MicrobiomeHumansMicrobial ConsortiaPeptide Biosynthesis, Nucleic Acid-IndependentPeptidesPolyketidesAnti-Bacterial AgentsAntifungal AgentsAntineoplastic AgentsPeptidesPolyketidesantibiotic resistanceantibioticsEscherichia coli (E. coli)Klebsiella pneumoniamicrobiomeSalmonella enterica

Identifiers

PMID28389564
PMCPMC5448083
OpenAlexW2604540065

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.