Evidence map›Paper›PMID 28389069›Full record

ArticleImmunity2017

A Tunable Diffusion-Consumption Mechanism of Cytokine Propagation Enables Plasticity in Cell-to-Cell Communication in the Immune System.

Alon Oyler-Yaniv, Jennifer Oyler-Yaniv, Benjamin M Whitlock, Zhiduo Liu, Ronald N Germain, Morgan Huse, Grégoire Altan-Bonnet, Oleg Krichevsky

Abstract read
In one paragraph

Article in Immunity, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 135 papers.

0numbers the graph read from it
0cells of the map it votes in
135citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

135 citing papers in PubMed.

  1. Review
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  9. Design principles of the cytotoxic CD8Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  10. Review
  11. Article
  12. Spatially structured inflammatory response in the presence of a uniform stimulus.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  13. Article
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  19. Dynamics and variegation in the Treg response to Interleukin-2.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  20. Review

75 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Alon Oyler-YanivPhysics Department, Ben Gurion University of the Negev, Beer-Sheva 84105, Israel; ImmunoDynamics Group, Cancer and Inflammation Program, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD 21701, USA; Computational Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA; Immunology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Jennifer Oyler-YanivImmunoDynamics Group, Cancer and Inflammation Program, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD 21701, USA; Computational Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA; Immunology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA; Immunology and Microbial Pathogenesis Program, Weill Cornell Graduate School of Medical Sciences, New York, NY 10065, USA.
Benjamin M WhitlockComputational Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA; Immunology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA; Biochemistry and Molecular Biology Graduate Program, Weill-Cornell Medical College, New York 10065, USA.
Zhiduo LiuLymphocyte Biology Section, Laboratory of Systems Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892, USA.
Ronald N GermainLymphocyte Biology Section, Laboratory of Systems Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892, USA.
Morgan HuseImmunology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Grégoire Altan-BonnetImmunoDynamics Group, Cancer and Inflammation Program, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD 21701, USA; Computational Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA; Immunology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA. Electronic address: gregoire.altan-bonnet@nih.gov.
Oleg KrichevskyPhysics Department, Ben Gurion University of the Negev, Beer-Sheva 84105, Israel; Computational Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA; Immunology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA; Ilse Kats Center for Nanoscience, Ben-Gurion University of the Negev, Beer-Sheva 84105, Israel. Electronic address: okrichev@bgu.ac.il.

Funding

Multiscale Analysis of Immune ResponsesZIAAI000545 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI GERMAIN, RONALD N · 2009 to 2025
$29.4M
Synaptic Control of Cytotoxic T cell FunctionR01AI087644 · NIAID · SLOAN-KETTERING INST CAN RESEARCH · PI HUSE, MORGAN A · 2010 to 2025
$7.3M
Phenotypic variability within isogenic population of lymphocytesZIABC011726 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI ALTAN-BONNET, GRÉGOIRE · 2016 to 2025
$3.9M
Cytokine coordination of collective immune responses against tumorsZIABC011728 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI ALTAN-BONNET, GREGOIRE · 2016 to 2023
$3.7M
Quantitative modeling of the phenotypic variability of individual T cells and theR01AI083408 · NIAID · SLOAN-KETTERING INST CAN RESEARCH · PI ALTAN-BONNET, GREGOIRE · 2009 to 2012
$1.9M
Self-organization of T lymphocyte activation into collective immune responsesR56AI083408 · NIAID · SLOAN-KETTERING INST CAN RESEARCH · PI HUSE, MORGAN A · 2014 to 2014
$537k
Quantitative modeling of the collective tuning of T cell activation.R56AI116863 · NIAID · SLOAN-KETTERING INST CAN RESEARCH · PI HUSE, MORGAN A · 2015 to 2015
$440k
Intramural NIH HHS Z99 AI999999Intramural NIH HHS Z99 CA999999Intramural NIH HHS ZIA BC011728NIAID NIH HHS R01 AI083408NIAID NIH HHS R01 AI087644NIAID NIH HHS R56 AI083408NIAID NIH HHS R56 AI116863
6 · The paper itself

Abstract

Immune cells communicate by exchanging cytokines to achieve a context-appropriate response, but the distances over which such communication happens are not known. Here, we used theoretical considerations and experimental models of immune responses in vitro and in vivo to quantify the spatial extent of cytokine communications in dense tissues. We established that competition between cytokine diffusion and consumption generated spatial niches of high cytokine concentrations with sharp boundaries. The size of these self-assembled niches scaled with the density of cytokine-consuming cells, a parameter that gets tuned during immune responses. In vivo, we measured interactions on length scales of 80-120 μm, which resulted in a high degree of cell-to-cell variance in cytokine exposure. Such heterogeneous distributions of cytokines were a source of non-genetic cell-to-cell variability that is often overlooked in single-cell studies. Our findings thus provide a basis for understanding variability in the patterning of immune responses by diffusible factors.

Indexed as

AnimalsCell CommunicationCell Line, TumorCells, CulturedCytokinesDiffusionFlow CytometryHumansImmune SystemImmunohistochemistryInterleukin-2Interleukin-2 Receptor alpha SubunitMice, Inbred C57BLMice, KnockoutMice, TransgenicModels, ImmunologicalCytokinesInterleukin-2Interleukin-2 Receptor alpha SubunitSTAT5 Transcription FactorCell-to-cell communicationsCell-to-cell variabilityCytokine nichesCytokinesDiffusion/ConsumptionInterleukin-2Quantitative ImmunologySTAT5Theoretical Modeling

Identifiers

PMID28389069
PMCPMC5442880

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.