ArticleBMC genetics2017
Genome-wide identification and expression analysis of ClLAX, ClPIN and ClABCB genes families in Citrullus lanatus under various abiotic stresses and grafting.
Article in BMC genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.
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24 citing papers in PubMed, 47 citations in OpenAlex.
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- Characterization of the PIN Auxin Efflux Carrier Gene Family and Its Expression during Zygotic Embryogenesis inPlants (Basel, Switzerland) · 2023Article
- Genome-Wide Characterization of PIN Auxin Efflux Carrier Gene Family inInternational journal of molecular sciences · 2022Article
- Roles of Auxin in the Growth, Development, and Stress Tolerance of Horticultural Plants.Cells · 2022Review
- Expression analysis ofFrontiers in plant science · 2022Article
- Genome-wide identification and expression analysis ofFrontiers in plant science · 2022Article
- Light quality and quantity affect graft union formation of tomato plants.Scientific reports · 2021Article
- Comprehensive Analysis and Expression Profiling of PIN, AUX/LAX, and ABCB Auxin Transporter Gene Families inBiology · 2021Article
- Comparative transcriptome combined with metabolome analyses revealed key factors involved in nitric oxide (NO)-regulated cadmium stress adaptation in tall fescue.BMC genomics · 2020Article
- Characterization of the Auxin Efflux Transporter PIN Proteins in Pear.Plants (Basel, Switzerland) · 2020Article
- Expression Profile ofPlants (Basel, Switzerland) · 2020Article
- Full-Length Transcriptome Analysis of theInternational journal of molecular sciences · 2020Article
- Vegetable Grafting From a Molecular Point of View: The Involvement of Epigenetics in Rootstock-Scion Interactions.Frontiers in plant science · 2020Review
- Systemic Long-Distance Signaling and Communication Between Rootstock and Scion in Grafted Vegetables.Frontiers in plant science · 2020Review
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Authors and funding
7 authors at 4 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundAuxin plays an important role in regulating plant growth and development as well as in the response of plants to abiotic stresses. Auxin is transported by three kinds of major protein families, including the AUXIN RESISTANT 1/LIKE AUX1 (AUX⁄LAX) influx carriers, the PIN-FORMED (PIN) efflux carriers and the ATP binding cassette B/P-glycoprotein/Multidrug-resistance (ABCB/MDR/PGP) efflux/condition carriers. The biological function of several auxin transporter genes has been well characterized in Arabidopsis thaliana. However, their function in response to exogenous auxin and abiotic stresses in watermelon (Citrullus lanatus. L) remained unknown.
resultsHere, the latest updated watermelon genome was used to characterise the ClLAX, ClPIN and ClABCB family genes from watermelon. The genome-wide analysis of the ClLAX, ClPIN and ClABCB family genes, including chromosome localisation, gene structure, and phylogenic relationships, was carried out. Seven ClLAXs, 11 ClPINs and 15 ClABCBs were mapped on 10 watermelon chromosomes. The expression profiles of the ClLAX, ClPIN and ClABCB genes under exogenous indole-3-acetic acid and various abiotic stresses (salt, drought, and cold stresses) treatments were performed by quantitative real-time PCR (qRT-PCR). The transcriptional level of majority ClLAX, ClPIN and ClABCB genes were changed by abiotic stresses in both shoots and roots. We also analysed the expression levels of ClLAX, ClPIN and ClABCB genes in graft response.
conclusionAnalysis of the expression patterns of ClLAX, ClPIN and ClABCB genes under salt, drought, cold treatment and grafting response helps us to understand the possible roles of auxin transporter genes in watermelon adaptation to environmental stresses.
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