Evidence map›Paper›PMID 28388414›Full record

ArticleCell2017

Transcription Impacts the Efficiency of mRNA Translation via Co-transcriptional N6-adenosine Methylation.

Boris Slobodin, Ruiqi Han, Vittorio Calderone, Joachim A F Oude Vrielink, Fabricio Loayza-Puch, Ran Elkon, Reuven Agami

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 279 papers.

0numbers the graph read from it
0cells of the map it votes in
279citing papers in PubMed
20.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

279 citing papers in PubMed, 448 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. mNature reviews. Neuroscience · 2026
    Review
  6. Article
  7. Article
  8. Article
  9. Regulation of mCell biology and toxicology · 2026
    Review
  10. Targeting intracellular mRNA mJournal of advanced research · 2026
    Review
  11. NNature reviews. Cancer · 2026
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. High-resolution HIV-1 mNAR genomics and bioinformatics · 2025
    Article
  18. Review
  19. Article
  20. Reduced Expression of mInternational journal of molecular sciences · 2025
    Article

219 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Boris SlobodinDivision of Oncogenomics, Netherlands Cancer Institute, Plesmanlaan 121, 1066 CX Amsterdam, the Netherlands. Electronic address: boris.slobodin@gmail.com.
Ruiqi HanDivision of Oncogenomics, Netherlands Cancer Institute, Plesmanlaan 121, 1066 CX Amsterdam, the Netherlands.
Vittorio CalderoneDivision of Oncogenomics, Netherlands Cancer Institute, Plesmanlaan 121, 1066 CX Amsterdam, the Netherlands.
Joachim A F Oude VrielinkDivision of Oncogenomics, Netherlands Cancer Institute, Plesmanlaan 121, 1066 CX Amsterdam, the Netherlands.
Fabricio Loayza-PuchDivision of Oncogenomics, Netherlands Cancer Institute, Plesmanlaan 121, 1066 CX Amsterdam, the Netherlands.
Ran ElkonDepartment of Human Molecular Genetics and Biochemistry, Sackler School of Medicine, Tel Aviv University, Tel Aviv 69978, Israel. Electronic address: ranel@tauex.tau.ac.il.
Reuven AgamiDivision of Oncogenomics, Netherlands Cancer Institute, Plesmanlaan 121, 1066 CX Amsterdam, the Netherlands; Department of Genetics, Erasmus University Medical Center, Wytemaweg 80, 3015 CN Rotterdam, the Netherlands. Electronic address: r.agami@nki.nl.
The Netherlands Cancer Institute · NLTel Aviv University · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcription and translation are two main pillars of gene expression. Due to the different timings, spots of action, and mechanisms of regulation, these processes are mainly regarded as distinct and generally uncoupled, despite serving a common purpose. Here, we sought for a possible connection between transcription and translation. Employing an unbiased screen of multiple human promoters, we identified a positive effect of TATA box on translation and a general coupling between mRNA expression and translational efficiency. Using a CRISPR-Cas9-mediated approach, genome-wide analyses, and in vitro experiments, we show that the rate of transcription regulates the efficiency of translation. Furthermore, we demonstrate that m

Indexed as

Gene Expression RegulationProtein BiosynthesisRNA Processing, Post-TranscriptionalTranscription, GeneticAdenosineHumansMethylationPeptide Chain Initiation, TranslationalRNA, MessengerRNA Polymerase IITATA BoxAdenosineN-methyladenosineRNA, MessengerRNA Polymerase IIgene regulationm(6)AN6-adenosine methylationRNAPIITATAtranscriptiontranslation efficiency

Identifiers

PMID28388414
PMCPMC5388891
OpenAlexW2604637348

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.