Evidence map›Paper›PMID 28386790›Full record

ArticleExtremophiles : life under extreme conditions2017

Halocin C8: an antimicrobial peptide distributed among four halophilic archaeal genera: Natrinema, Haloterrigena, Haloferax, and Halobacterium.

Alison Besse, Manon Vandervennet, Christophe Goulard, Jean Peduzzi, Stéphanie Isaac, Sylvie Rebuffat, Alyssa Carré-Mlouka

Abstract read
PubMed Publisher
In one paragraph

Article in Extremophiles : life under extreme conditions, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Halocins and CMarine drugs · 2024
    Review
  3. Article
  4. Halocin H4 is activated through cleavage by halolysin HlyR4.Applied and environmental microbiology · 2024
    Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Review
  10. Review
  11. Review
  12. The microbiome-shaping roles of bacteriocins.Nature reviews. Microbiology · 2021
    Review
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Alison BesseMolécules de Communication et Adaptation des Microorganismes (MCAM, UMR 7245 CNRS-MNHN), Sorbonne Universités, Muséum National d'Histoire Naturelle, Centre national de la Recherche scientifique (CNRS), CP 54, 57 rue Cuvier, 75005, Paris, France.
Manon VandervennetMolécules de Communication et Adaptation des Microorganismes (MCAM, UMR 7245 CNRS-MNHN), Sorbonne Universités, Muséum National d'Histoire Naturelle, Centre national de la Recherche scientifique (CNRS), CP 54, 57 rue Cuvier, 75005, Paris, France.
Christophe GoulardMolécules de Communication et Adaptation des Microorganismes (MCAM, UMR 7245 CNRS-MNHN), Sorbonne Universités, Muséum National d'Histoire Naturelle, Centre national de la Recherche scientifique (CNRS), CP 54, 57 rue Cuvier, 75005, Paris, France.
Jean PeduzziMolécules de Communication et Adaptation des Microorganismes (MCAM, UMR 7245 CNRS-MNHN), Sorbonne Universités, Muséum National d'Histoire Naturelle, Centre national de la Recherche scientifique (CNRS), CP 54, 57 rue Cuvier, 75005, Paris, France.
Stéphanie IsaacMolécules de Communication et Adaptation des Microorganismes (MCAM, UMR 7245 CNRS-MNHN), Sorbonne Universités, Muséum National d'Histoire Naturelle, Centre national de la Recherche scientifique (CNRS), CP 54, 57 rue Cuvier, 75005, Paris, France.
Sylvie RebuffatMolécules de Communication et Adaptation des Microorganismes (MCAM, UMR 7245 CNRS-MNHN), Sorbonne Universités, Muséum National d'Histoire Naturelle, Centre national de la Recherche scientifique (CNRS), CP 54, 57 rue Cuvier, 75005, Paris, France.
Alyssa Carré-MloukaMolécules de Communication et Adaptation des Microorganismes (MCAM, UMR 7245 CNRS-MNHN), Sorbonne Universités, Muséum National d'Histoire Naturelle, Centre national de la Recherche scientifique (CNRS), CP 54, 57 rue Cuvier, 75005, Paris, France. acarre@mnhn.fr.
Molécules de Communication et Adaptation des Micro-organismes · FRSorbonne Université · FRCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Halophilic archaea thrive in hypersaline ecosystems and produce antimicrobial peptides (AMPs) named halocins. AMPs are essential effectors of microbial interactions in natural ecosystems. Halocin C8 is a 7.4 kDa peptide produced by Natrinema sp. AS7092. Surrounded by genes involved in regulation and transport, the halC8 gene encodes a precursor, processed into the mature halocin and an immunity protein, protecting the producing strain against its halocin. This feature constitutes a unique property of halocin C8, as known AMPs and their immunity proteins are generally encoded on distinct ORFs in an operon. By complementary in silico and PCR-based approaches, the presence of halC8 in halophilic archaea collected from various parts of the world was evidenced. The full-length halC8 gene is restricted and consistently found in the genomes of strains belonging to the phylogenetically related genera Natrinema and Haloterrigena, along with transport and regulation genes. Functional expression of halC8 was demonstrated by RT-PCR and antimicrobial assays. Active halocin C8 was shown to contain five disulphide bridges, presumably conferring a compact structure resistant to harsh environmental conditions. In other archaeal genera, Haloferax and Halobacterium, genes encoding halocin C8 with diverging immunity protein moiety were evidenced. A phylogenetic analysis of halocin C8 sequences was conducted.

Indexed as

Archaeal ProteinsBacteriocinsDisulfidesExtreme EnvironmentsGenes, ArchaealHalobacteriaceaeOpen Reading FramesOperonPhylogenySalinityArchaeal ProteinsBacteriocinsDisulfidesAntimicrobial peptidesHalocin C8Halophilic archaeaHaloterrigenaHypersaline ecosystemsNatrinema

Identifiers

PMID28386790
OpenAlexW2605129970

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.