Evidence map›Paper›PMID 28386678›Full record

ArticleFamilial cancer2017

Identification of novel potential genetic predictors of urothelial bladder carcinoma susceptibility in Pakistani population.

Syeda Hafiza Benish Ali, Kashif Sardar Bangash, Abdur Rauf, Muhammad Younis, Khursheed Anwar, Raja Khurram, Muhammad Athar Khawaja, Maleeha Azam, Abid Ali Qureshi, Saeed Akhter and 2 more

Abstract read
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In one paragraph

Article in Familial cancer, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 2 pooled it
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 2 syntheses or guidelines pooled it, 10 citations in OpenAlex.

  1. Investigation ofBioscience reports · 2019
    Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 2 countries.

Syeda Hafiza Benish AliDepartment of Biosciences, Faculty of Science, COMSATS Institute of Information Technology, Park Road, Tarlai Kalan, Islamabad, 45600, Pakistan. benishalishah@gmail.com.
Kashif Sardar BangashPakistan Atomic Energy Commission General Hospital, Islamabad, 44000, Pakistan.
Abdur RaufNishtar Medical College & Hospital, Multan, 60000, Pakistan.
Muhammad YounisDepartment of Urology, Mayo Hospital, Lahore, 54000, Pakistan.
Khursheed AnwarPakistan Atomic Energy Commission General Hospital, Islamabad, 44000, Pakistan.
Raja KhurramDepartment of Biosciences, Faculty of Science, COMSATS Institute of Information Technology, Park Road, Tarlai Kalan, Islamabad, 45600, Pakistan.
Muhammad Athar KhawajaDepartment of Urology, Shifa International Hospital, Islamabad, 44000, Pakistan.
Maleeha AzamDepartment of Biosciences, Faculty of Science, COMSATS Institute of Information Technology, Park Road, Tarlai Kalan, Islamabad, 45600, Pakistan.
Abid Ali QureshiDepartment of Radiology, The Children's Hospital & The Institute of Child Health, Lahore, 54000, Pakistan.
Saeed AkhterDepartment of Urology, Shifa International Hospital, Islamabad, 44000, Pakistan.
Lambertus A KiemeneyDepartment for Health Evidence and Department of Urology, Radboud University Medical Centre, P.O. Box 9101, 6500 HB, Nijmegen, The Netherlands.
Raheel QamarDepartment of Biosciences, Faculty of Science, COMSATS Institute of Information Technology, Park Road, Tarlai Kalan, Islamabad, 45600, Pakistan. raheelqamar@hotmail.com.
COMSATS University Islamabad · PKPakistan Atomic Energy Commission · PKShifa International Hospital · PKIsra University · PKMayo Hospital · PKNishtar Medical College and Hospital · PKRadboud University Nijmegen · NL

Funding

Pakistan Academy of Sciences 5-9/PAS
6 · The paper itself

Abstract

Urothelial bladder carcinoma (UBC) is the most common among urinary bladder neoplasms. We carried out a preliminary study to determine the genetic etiology of UBC in Pakistani population, for this 25 sequence variants from 17 candidate genes were studied in 400 individuals by using polymerase chain reaction-based techniques. Multivariate logistic regression analysis was performed for association analysis of the overall data as well as the data stratified by smoking status, tumor grade and tumor stage. Variants of GSTM1, IGFBP3, LEPR and ACE were found to be associated with altered UBC risk in the overall comparison. CYP1B1 and CDKN1A variants displayed a risk modulation among smokers; IGFBP3 and LEPR variants among non-smokers while GSTM1 polymorphism exhibited association with both. GSTM1 and LEPR variants conferred an altered susceptibility to low grade UBC; GSTT1, IGFBP3 and PPARG variants to high grade UBC while ACE polymorphism to both grades. GSTM1 and LEPR variants exhibited risk modulation for non-muscle-invasive bladder cancer (NMIBC); GSTT1 and PPARG variants for muscle-invasive bladder cancer (MIBC), and ACE variant for NMIBC as well as MIBC. In general, the susceptibility markers were common for low grade and NMIBC; and distinct from those for high grade and MIBC indicating the distinct pathologies of both groups. In brief, our results conform to reports of previously associated variants in addition to identifying novel potential genetic predictors of UBC susceptibility.

Indexed as

AdultAgedCase-Control StudiesCytochrome P-450 CYP1B1FemaleGenetic Predisposition to DiseaseGlutathione TransferaseHumansInsulin-Like Growth Factor Binding Protein 3MaleMiddle AgedPakistanPeptidyl-Dipeptidase APolymorphism, GeneticPPAR gammaReceptors, LeptinACE protein, humanCYP1B1 protein, humanCytochrome P-450 CYP1B1Glutathione TransferaseIGFBP3 protein, humanInsulin-Like Growth Factor Binding Protein 3LEPR protein, humanPeptidyl-Dipeptidase APPAR gammaReceptors, LeptinCancerGenetic association studyGenetic polymorphismsGenetic predictorsPakistanUrothelial bladder carcinoma

Identifiers

PMID28386678
OpenAlexW2604624288

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.