Evidence map›Paper›PMID 28385663›Full record

ArticleJournal of proteomics2017

A curated gluten protein sequence database to support development of proteomics methods for determination of gluten in gluten-free foods.

Sophie Bromilow, Lee A Gethings, Mike Buckley, Mike Bromley, Peter R Shewry, James I Langridge, E N Clare Mills

Open access · hybridAbstract read
In one paragraph

Article in Journal of proteomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 80 citations in OpenAlex.

  1. Genomic diversity at thePlant diversity · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Targeting Induced Local Lesions in the WheatFrontiers in nutrition · 2022
    Article
  10. A Review of Health-Beneficial Properties of Oats.Foods (Basel, Switzerland) · 2021
    Review
  11. Casomorphins and Gliadorphins Have Diverse Systemic Effects Spanning Gut, Brain and Internal Organs.International journal of environmental research and public health · 2021
    Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Sophie BromilowSchool of Biological Sciences, Manchester Institute of Biotechnology, Manchester Academic Health Sciences Centre, University of Manchester, M17DN, UK.
Lee A GethingsWaters Corporation, Stamford Avenue, Altrincham Road, Wilmslow SK9 4AX, UK.
Mike BuckleySchool of Earth and Environmental Sciences, Manchester Institute of Biotechnology, University of Manchester, M17DN, UK.
Mike BromleyGenon Laboratories Limited, Cragg Vale, Halifax, UK.
Peter R ShewryRothamsted Research, Harpenden, UK.
James I LangridgeWaters Corporation, Stamford Avenue, Altrincham Road, Wilmslow SK9 4AX, UK.
E N Clare MillsSchool of Biological Sciences, Manchester Institute of Biotechnology, Manchester Academic Health Sciences Centre, University of Manchester, M17DN, UK. Electronic address: clare.mills@manchester.ac.uk.
Manchester Academic Health Science Centre · GBWaters (United Kingdom) · GBRothamsted Research · GBUniversity of Manchester · GB

Funding

Biotechnology and Biological Sciences Research Council BB/K01305X/1
6 · The paper itself

Abstract

The unique physiochemical properties of wheat gluten enable a diverse range of food products to be manufactured. However, gluten triggers coeliac disease, a condition which is treated using a gluten-free diet. Analytical methods are required to confirm if foods are gluten-free, but current immunoassay-based methods can unreliable and proteomic methods offer an alternative but require comprehensive and well annotated sequence databases which are lacking for gluten. A manually a curated database (GluPro V1.0) of gluten proteins, comprising 630 discrete unique full length protein sequences has been compiled. It is representative of the different types of gliadin and glutenin components found in gluten. An in silico comparison of their coeliac toxicity was undertaken by analysing the distribution of coeliac toxic motifs. This demonstrated that whilst the α-gliadin proteins contained more toxic motifs, these were distributed across all gluten protein sub-types. Comparison of annotations observed using a discovery proteomics dataset acquired using ion mobility MS/MS showed that more reliable identifications were obtained using the GluPro V1.0 database compared to the complete reviewed Viridiplantae database. This highlights the value of a curated sequence database specifically designed to support the proteomic workflows and the development of methods to detect and quantify gluten. SIGNIFICANCE: We have constructed the first manually curated open-source wheat gluten protein sequence database (GluPro V1.0) in a FASTA format to support the application of proteomic methods for gluten protein detection and quantification. We have also analysed the manually verified sequences to give the first comprehensive overview of the distribution of sequences able to elicit a reaction in coeliac disease, the prevalent form of gluten intolerance. Provision of this database will improve the reliability of gluten protein identification by proteomic analysis, and aid the development of targeted mass spectrometry methods in line with Codex Alimentarius Commission requirements for foods designed to meet the needs of gluten intolerant individuals.

Indexed as

Databases, ProteinAmino Acid SequenceCeliac DiseaseDiet, Gluten-FreeGliadinGlutensHumansProteomicsGliadingluteninGlutensCeliac toxic motifDatabaseGlutenProteomicsTriticum aestivum

Identifiers

PMID28385663
PMCPMC5479479
OpenAlexW2605096924

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.