Evidence map›Paper›PMID 28383696›Full record

ArticleNucleic acids research2017

The LSH/HELLS homolog Irc5 contributes to cohesin association with chromatin in yeast.

Ireneusz Litwin, Tomasz Bakowski, Ewa Maciaszczyk-Dziubinska, Robert Wysocki

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

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  12. FACT mediates cohesin function on chromatin.Nature structural & molecular biology · 2019
    Article
  13. Article
  14. Review
  15. Article
  16. New insights into cohesin loading.Current genetics · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ireneusz LitwinInstitute of Experimental Biology, University of Wroclaw, 50-328 Wroclaw, Poland.
Tomasz BakowskiInstitute of Experimental Biology, University of Wroclaw, 50-328 Wroclaw, Poland.
Ewa Maciaszczyk-DziubinskaInstitute of Experimental Biology, University of Wroclaw, 50-328 Wroclaw, Poland.
Robert WysockiInstitute of Experimental Biology, University of Wroclaw, 50-328 Wroclaw, Poland.
University of Wrocław · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Accurate chromosome segregation is essential for every living cell as unequal distribution of chromosomes during cell division may result in genome instability that manifests in carcinogenesis and developmental disorders. Irc5 from Saccharomyces cerevisiae is a member of the conserved Snf2 family of ATP-dependent DNA translocases and its function is poorly understood. Here, we identify Irc5 as a novel interactor of the cohesin complex. Irc5 associates with Scc1 cohesin subunit and contributes to cohesin binding to chromatin. Disruption of IRC5 decreases cohesin levels at centromeres and chromosome arms, causing premature sister chromatid separation. Moreover, reduced cohesin occupancy at the rDNA region in cells lacking IRC5 leads to the loss of rDNA repeats. We also show that the translocase activity of Irc5 is required for its function in cohesion pathway. Finally, we demonstrate that in the absence of Irc5 both the level of chromatin-bound Scc2, a member of cohesin loading complex, and physical interaction between Scc1 and Scc2 are reduced. Our results suggest that Irc5 is an auxiliary factor that is involved in cohesin association with chromatin.

Indexed as

Adenosine TriphosphatasesCell Cycle ProteinsChromatinChromosomal Proteins, Non-HistoneChromosomes, FungalCohesinsDNA, RibosomalProtein StabilitySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSister Chromatid ExchangeAdenosine TriphosphatasesCell Cycle ProteinsChromatinChromosomal Proteins, Non-HistoneCohesinsDNA, RibosomalIrc5 protein, S cerevisiaeMCD1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSCC2 protein, S cerevisiae

Identifiers

PMID28383696
PMCPMC5499779
OpenAlexW2604678230

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.