Evidence map›Paper›PMID 28379562›Full record

ArticlePlant & cell physiology2017

Light Sheet Fluorescence Microscopy Quantifies Calcium Oscillations in Root Hairs of Arabidopsis thaliana.

Alessia Candeo, Fabrizio G Doccula, Gianluca Valentini, Andrea Bassi, Alex Costa

Open access · bronzeAbstract read
In one paragraph

Article in Plant & cell physiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 60 citations in OpenAlex.

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  11. Plant-environment microscopy tracks interactions ofProceedings of the National Academy of Sciences of the United States of America · 2021
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  12. Review
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  19. The structural bases for agonist diversity in anProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  20. Plant Calcium Signaling in Response to Potassium Deficiency.International journal of molecular sciences · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Alessia CandeoDipartimento di Fisica, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy.
Fabrizio G DocculaDipartimento di Bioscienze, Università degli Studi di Milano, Via Giovanni Celoria 26, 20133 Milano, Italy.
Gianluca ValentiniDipartimento di Fisica, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy.
Andrea BassiDipartimento di Fisica, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy.
Alex CostaDipartimento di Bioscienze, Università degli Studi di Milano, Via Giovanni Celoria 26, 20133 Milano, Italy.
Politecnico di Milano · ITUniversity of Milan · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Calcium oscillations play a role in the regulation of the development of tip-growing plant cells. Using optical microscopy, calcium oscillations have been observed in a few systems (e.g. pollen tubes, fungal hyphae and algal rhizoids). High-resolution, non-phototoxic and rapid imaging methods are required to study the calcium oscillation in root hairs. We show that light sheet fluorescence microscopy is optimal to image growing root hairs of Arabidopsis thaliana and to follow their oscillatory tip-focused calcium gradient. We describe a protocol for performing live imaging of root hairs in seedlings expressing the cytosol-localized ratiometric calcium indicator Yellow Cameleon 3.6. Using this protocol, we measured the calcium gradient in a large number of root hairs. We characterized their calcium oscillations and correlated them with the rate of hair growth. The method was then used to screen the effect of auxin on the properties of the growing root hairs.

Indexed as

Calcium SignalingArabidopsisCalmodulinCytosolLuminescent ProteinsMicroscopy, FluorescencePlant RootsRecombinant Fusion ProteinsCalmodulinLuminescent ProteinsRecombinant Fusion ProteinsYCaM3.6 proteinArabidopsis thalianaCalcium oscillationsCameleon calcium probeLight sheet fluorescence microscopyRoot hairs

Identifiers

PMID28379562
PMCPMC6383626
OpenAlexW2605262779

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.