Evidence map›Paper›PMID 28379545›Full record

ArticleCarcinogenesis2017

Reduced mRNA expression of nucleotide excision repair genes in lymphocytes and risk of squamous cell carcinoma of the head and neck.

Peng Han, Fengqin Gao, Hongliang Liu, Zhensheng Liu, Qiong Shi, Jesse D Troy, Kouros Owzar, Walter Lee, Jose P Zevallos, Erich M Sturgis and 1 more

Abstract read
In one paragraph

Article in Carcinogenesis, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Peng HanDuke Cancer Institute, Duke University Medical Center and.
Fengqin GaoDuke Cancer Institute, Duke University Medical Center and.
Hongliang LiuDuke Cancer Institute, Duke University Medical Center and.
Zhensheng LiuDuke Cancer Institute, Duke University Medical Center and.
Qiong ShiDuke Cancer Institute, Duke University Medical Center and.
Jesse D TroyDuke Cancer Institute, Duke University Medical Center and.
Kouros OwzarDuke Cancer Institute, Duke University Medical Center and.
Walter LeeDuke Cancer Institute, Duke University Medical Center and.
Jose P ZevallosDepartment of Otolaryngology-Head and Neck Surgery and.
Erich M SturgisDepartments of Head and Neck Surgery and.
Qingyi WeiDuke Cancer Institute, Duke University Medical Center and.

Funding

Genotypes and Phenotypes of Apoptosis and Risk of Head and Neck CancerR01CA131274 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI WEI, QINGYI · 2009 to 2013
$3.0M
NCI NIH HHS R01 CA131274
6 · The paper itself

Abstract

Nucleotide excision repair (NER) plays a critical role in the development of smoking-related cancers. We hypothesize that mRNA expression levels of NER genes are associated with risk of the squamous cell carcinoma of head and neck (SCCHN). To test this hypothesis, we conducted a case-control study of 260 SCCHN patients and 246 cancer-free controls by measuring the mRNA expression levels of eight core NER genes in cultured peripheral lymphocytes. Compared with the controls, cases had statistically significantly lower expression levels of DDB1 and ERCC3 (P = 0.015 and 0.041, respectively). Because DDB1 and ERCC3 expression levels were highly correlated, we used DDB1 for further multivariate analyses and modeling. After dividing the subjects by controls' quartiles of expression levels, we found an association between an increased risk of SCCHN and low DDB1 expression levels [adjusted ORs and 95% CIs: 1.92 and 1.11-3.32, 1.48 and 0.85-2.59, 2.00 and 1.15-3.45 for the 2nd-4th quartiles, respectively, compared with the 1st quartile; Ptrend = 0.026]. We also identified a multiplicative interaction between sex and DDB1 expression levels (P = 0.007). Finally, the expanded model with gene expression levels, in addition to demographic and clinical variables, on SCCHN risk was significantly improved, especially among men. In conclusion, reduced DDB1 expression levels were associated with an increased risk of SCCHN. However, these results need to be validated in larger studies.

Indexed as

DNA RepairGene Expression Regulation, NeoplasticGenetic Predisposition to DiseaseRNA, MessengerAdultAgedAged, 80 and overCarcinoma, Squamous CellCase-Control StudiesDNA-Binding ProteinsDNA HelicasesEpistasis, GeneticFemaleGenetic Association StudiesHead and Neck NeoplasmsHumansDDB1 protein, humanDNA-Binding ProteinsDNA HelicasesRNA, MessengerXPBC-ERCC-3 protein

Identifiers

PMID28379545
PMCPMC5461936

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.