Evidence map›Paper›PMID 28377799›Full record

ArticleChemical science2017

Electronic tuning of self-healing fluorophores for live-cell and single-molecule imaging.

Qinsi Zheng, Steffen Jockusch, Zhou Zhou, Roger B Altman, Hong Zhao, Wesley Asher, Michael Holsey, Signe Mathiasen, Peter Geggier, Jonathan A Javitch and 1 more

Abstract read
In one paragraph

Article in Chemical science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Article
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  4. Review
  5. Local GPCR density tips the balance of μ-opioid receptor trafficking.bioRxiv : the preprint server for biology · 2026
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  6. Review
  7. A gentle palette of plasma membrane dyes.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Orthogonal Site-Specific Dual Bioconjugation of Aryl and Alkyl Thiols.Journal of the American Chemical Society · 2025
    Article
  9. Article
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  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Methods for automating the analysis of live-cell single-molecule FRET data.Frontiers in cell and developmental biology · 2023
    Article
  17. Article
  18. Multi-color live-cell STED nanoscopy of mitochondria with a gentle inner membrane stain.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  19. Cholesterol inhibits human voltage-gated proton channel hHv1.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Qinsi ZhengTri-Institutional Training Program in Chemical Biology, Weill Cornell Medicine, New York, NY.
Steffen JockuschDepartment of Chemistry, Columbia University, New York, NY.
Zhou ZhouDepartment of Physiology and Biophysics, Weill Cornell Medicine, New York, NY.
Roger B AltmanDepartment of Physiology and Biophysics, Weill Cornell Medicine, New York, NY.
Hong ZhaoDepartment of Physiology and Biophysics, Weill Cornell Medicine, New York, NY.
Wesley AsherDepartments of Psychiatry and Pharmacology, Columbia University College of Physicians & Surgeons.
Michael HolseyDepartments of Psychiatry and Pharmacology, Columbia University College of Physicians & Surgeons.
Signe MathiasenDepartments of Psychiatry and Pharmacology, Columbia University College of Physicians & Surgeons.
Peter GeggierDepartments of Psychiatry and Pharmacology, Columbia University College of Physicians & Surgeons.
Jonathan A JavitchDepartments of Psychiatry and Pharmacology, Columbia University College of Physicians & Surgeons; Division of Molecular Therapeutics, New York State Psychiatric Institute.
Scott C BlanchardTri-Institutional Training Program in Chemical Biology, Weill Cornell Medicine, New York, NY; Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY.

Funding

Structure of the Dopamine D2-Like Receptor Binding SitesR01MH054137 · NIMH · NEW YORK STATE PSYCHIATRIC INSTITUTE DBA RESEARCH FOUNDATION FOR MENTAL HYGIENE, INC · PI JAVITCH, JONATHAN A · 1995 to 2025
$12.0M
Next-generation Fluorescent Probes for Biological ResearchR01GM098859 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI BLANCHARD, SCOTT C · 2012 to 2019
$2.9M
Molecular Determinants for the Action of PsychostimulantsK05DA022413 · NIDA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI JAVITCH, JONATHAN A · 2007 to 2016
$1.3M
NIDA NIH HHS K05 DA022413NIGMS NIH HHS R01 GM098859NIMH NIH HHS R01 MH054137
6 · The paper itself

Abstract

Bright, long-lasting organic fluorophores enable a broad range of imaging applications. "Self-healing" fluorophores, in which intra-molecularly linked protective agents quench photo-induced reactive species, exhibit both enhanced photostability and biological compatibility. However, the self-healing strategy has yet to achieve its predicted potential, particularly in the presence of ambient oxygen where live-cell imaging studies must often be performed. To identify key bottlenecks in this technology that can be used to guide further engineering developments, we synthesized a series of Cy5 derivatives linked to the protective agent cyclooctatetraene (COT) and examined the photophysical mechanisms curtailing their performance. The data obtained reveal that the photostability of self-healing fluorophores is limited by reactivity of the COT protective agent. The addition of electron withdrawing substituents to COT reduced its susceptibility to reactions with molecular oxygen and the fluorophore to which it is attached and increased its capacity to participate in triplet energy transfer. Exploiting these insights, we designed and synthesized a suite of modified COT-fluorophores spanning the visible spectrum that exhibited markedly increased intra-molecular photostabilization. Under ambient oxygen conditions, the photostability of Cy3 and Cy5 fluorophore derivatives increased by 3- and 9-fold

Identifiers

PMID28377799
PMCPMC5299821

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.