Evidence map›Paper›PMID 28376122›Full record

ArticlePloS one2017

Unusually high mechanical stability of bacterial adhesin extender domains having calcium clamps.

Anneloes S Oude Vrielink, Tyler D R Vance, Arthur M de Jong, Peter L Davies, Ilja K Voets

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Anneloes S Oude VrielinkInstitute for Complex Molecular Systems, Eindhoven University of Technology, Eindhoven, Netherlands.
Tyler D R VanceDepartment of Biomedical and Molecular Sciences, Queen's University, Kingston, Canada.
Arthur M de JongInstitute for Complex Molecular Systems, Eindhoven University of Technology, Eindhoven, Netherlands.
Peter L DaviesDepartment of Biomedical and Molecular Sciences, Queen's University, Kingston, Canada.
Ilja K VoetsInstitute for Complex Molecular Systems, Eindhoven University of Technology, Eindhoven, Netherlands.ORCID http://orcid.org/0000-0003-3543-4821

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To gain insight into the relationship between protein structure and mechanical stability, single molecule force spectroscopy experiments on proteins with diverse structure and topology are needed. Here, we measured the mechanical stability of extender domains of two bacterial adhesins MpAFP and MhLap, in an atomic force microscope. We find that both proteins are remarkably stable to pulling forces between their N- and C- terminal ends. At a pulling speed of 1 μm/s, the MpAFP extender domain fails at an unfolding force Fu = 348 ± 37 pN and MhLap at Fu = 306 ± 51 pN in buffer with 10 mM Ca2+. These forces place both extender domains well above the mechanical stability of many other β-sandwich domains in mechanostable proteins. We propose that the increased stability of MpAFP and MhLap is due to a combination of both hydrogen bonding between parallel terminal strands and intra-molecular coordination of calcium ions.

Indexed as

Adhesins, BacterialAmino Acid SequenceBinding SitesBiomechanical PhenomenaCalciumHydrogen BondingMarinobacterMarinomonasMicroscopy, Atomic ForceModels, MolecularProtein DomainsProtein EngineeringProtein StabilityRecombinant ProteinsSequence Homology, Amino AcidAdhesins, BacterialCalciumRecombinant Proteins

Identifiers

PMID28376122
PMCPMC5380327

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.