Evidence map›Paper›PMID 28376100›Full record

ArticlePloS one2017

Overexpression of a pine Dof transcription factor in hybrid poplars: A comparative study in trees growing under controlled and natural conditions.

Marina Rueda-López, María Belén Pascual, Mercedes Pallero, Luisa María Henao, Berta Lasa, Ivan Jauregui, Pedro M Aparicio-Tejo, Francisco M Cánovas, Concepción Ávila

Open access · goldAbstract readComparative Study
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. DOF gene family expansion and diversification.Genetics and molecular biology · 2024
    Article
  3. Ectopic expression of theFrontiers in plant science · 2023
    Article
  4. Review
  5. Review
  6. Article
  7. Characterization of a High Hierarchical Regulator,Frontiers in plant science · 2021
    Article
  8. Overexpression ofInternational journal of molecular sciences · 2020
    Article
  9. SNPeffect: identifying functional roles of SNPs using metabolic networks.The Plant journal : for cell and molecular biology · 2020
    Article
  10. TheFrontiers in plant science · 2020
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Marina Rueda-LópezDepartamento de Biología Molecular y Bioquímica, Facultad de Ciencias, Universidad de Málaga, Málaga, Spain.
María Belén PascualDepartamento de Biología Molecular y Bioquímica, Facultad de Ciencias, Universidad de Málaga, Málaga, Spain.
Mercedes PalleroDepartamento de Biología Molecular y Bioquímica, Facultad de Ciencias, Universidad de Málaga, Málaga, Spain.
Luisa María HenaoDepartamento de Biología Molecular y Bioquímica, Facultad de Ciencias, Universidad de Málaga, Málaga, Spain.
Berta LasaDepartamento de Ciencias del Medio Natural, Universidad Pública de Navarra, Pamplona, Spain.
Ivan JaureguiDepartamento de Ciencias del Medio Natural, Universidad Pública de Navarra, Pamplona, Spain.
Pedro M Aparicio-TejoDepartamento de Ciencias del Medio Natural, Universidad Pública de Navarra, Pamplona, Spain.
Francisco M CánovasDepartamento de Biología Molecular y Bioquímica, Facultad de Ciencias, Universidad de Málaga, Málaga, Spain.
Concepción ÁvilaDepartamento de Biología Molecular y Bioquímica, Facultad de Ciencias, Universidad de Málaga, Málaga, Spain.ORCID http://orcid.org/0000-0001-8817-7529
Universidad de Málaga · ESUniversidad Publica de Navarra · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this work, the role of the pine transcriptional regulator Dof 5 in carbon and nitrogen metabolism has been examined in poplar trees. The overexpression of the gene and potential effects on growth and biomass production were compared between trees growing in a growth chamber under controlled conditions and trees growing in a field trial during two growth seasons. Ten-week-old transgenic poplars exhibited higher growth than untransformed controls and exhibited enhanced capacity for inorganic nitrogen uptake in the form of nitrate. Furthermore, the transgenic trees accumulated significantly more carbohydrates such as glucose, fructose, sucrose and starch. Lignin content increased in the basal part of the stem likely due to the thicker stem of the transformed plants. The enhanced levels of lignin were correlated with higher expression of the PAL1 and GS1.3 genes, which encode key enzymes involved in the phenylalanine deamination required for lignin biosynthesis. However, the results in the field trial experiment diverged from those observed in the chamber system. The lines overexpressing PpDof5 showed attenuated growth during the two growing seasons and no modification of carbon or nitrogen metabolism. These results were not associated with a decrease in the expression of the transgene, but they can be ascribed to the nitrogen available in the field soil compared to that available for growth under controlled conditions. This work highlights the paramount importance of testing transgenic lines in field trials.

Indexed as

BiomassCarbohydrate MetabolismCarbonCelluloseGene DosageGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGenes, PlantHybridization, GeneticHydroponicsLigninNitrogenPinusPlant ProteinsPlants, Genetically ModifiedPopulusCarbonCelluloseLigninNitrogenPlant ProteinsTranscription Factors

Identifiers

PMID28376100
PMCPMC5380328
OpenAlexW2605189220

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.