Evidence map›Paper›PMID 28374953›Full record

ArticleJournal of clinical laboratory analysis2018

A duplex polymerase chain reaction-restriction fragment length polymorphism for rapid screening of methylenetetrahydrofolate reductase gene variants: Genotyping in acute leukemia.

Rim Frikha, Nouha Bouayed, Bochra Ben Rhouma, Leila Keskes, Tarek Rebai

Open access · bronzeAbstract read
In one paragraph

Article in Journal of clinical laboratory analysis, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Rim FrikhaLaboratory of Histology, Faculty of Medicine of Sfax, University of Sfax, Sfax, Tunisia.ORCID http://orcid.org/0000-0003-4415-8785
Nouha BouayedLaboratory of Histology, Faculty of Medicine of Sfax, University of Sfax, Sfax, Tunisia.
Bochra Ben RhoumaLaboratory of Histology, Faculty of Medicine of Sfax, University of Sfax, Sfax, Tunisia.
Leila KeskesLaboratory of Histology, Faculty of Medicine of Sfax, University of Sfax, Sfax, Tunisia.
Tarek RebaiLaboratory of Histology, Faculty of Medicine of Sfax, University of Sfax, Sfax, Tunisia.
University of Sfax · TN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMethylenetetrahydrofolate reductase (MTHFR; NM_005957.4) is the key enzyme for folate metabolism which plays in DNA biosynthesis and the epigenetic process of DNA methylation. MTHFR gene polymorphisms, the c. 677C>T and c. 1298A>C have been implicated as risk factors for several types of cancers as the acute leukemia.

aimWe have optimized a duplex polymerase chain reaction-restriction fragment length polymorphism assay (PCR-RFLP) for the simultaneous detection of both variants in acute leukemia patients, from Tunisia.

methodsGenomic DNA was extracted from EDTA-anticoagulant blood samples from a total of 50 patients suffering from acute leukemia (AL). After DNA extraction, the polymerase chain reaction using specific primers, designed using Primer 3 Software. Restriction Fragment Length Polymorphism (RFLP) was performed in two separate tubes followed by agarose gel electrophoresis.

conclusionThis new method has proved to be a rapid, simple, and reliable method that should facilitate high throughput genotyping of MTHFR polymorphisms in acute leukemia.

Indexed as

Genotyping TechniquesHumansLeukemiaMethylenetetrahydrofolate Reductase (NADPH2)Polymerase Chain ReactionPolymorphism, Restriction Fragment LengthMethylenetetrahydrofolate Reductase (NADPH2)methylenetetrahydrofolate reductasepolymerase chain reactionpolymorphismsrestriction fragment length polymorphism

Identifiers

PMID28374953
PMCPMC6817008
OpenAlexW2605221517

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.