Evidence map›Paper›PMID 28374932›Full record

ArticleJournal of clinical laboratory analysis2018

Genotyping of commensal Neisseria spp strains by pulsed-field gel electrophoresis and 16S rRNA gene sequencing.

Arij Mechergui, Wafa Achour, Assia Ben Hassen

Open access · bronzeAbstract read
In one paragraph

Article in Journal of clinical laboratory analysis, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution.

Arij MecherguiThe National Bone Marrow Transplant Centre, Tunis, Tunisia.ORCID http://orcid.org/0000-0003-4433-5091
Wafa AchourThe National Bone Marrow Transplant Centre, Tunis, Tunisia.
Assia Ben HassenThe National Bone Marrow Transplant Centre, Tunis, Tunisia.
Faculté de médecine de Tunis

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWe investigated the diversity of the primary sequences of the 16S rRNA genes among 46 commensal Neisseria strains and evaluated the use of this approach as a molecular typing tool in comparison with PFGE analysis.

methodsIdentification to the genus was done using conventional methods and API NH (bio-Mérieux

resultsFourteen, two, three and fourteen 16S rRNA sequence types were found among twenty Neisseria flavescens, two Neisseria sicca, five Neisseria macacae and nineteen Neisseria mucosa clinical isolates. Forty-three different PFGE patterns were found among the tested strains.

conclusionWe demonstrated a high diversity among 16S rRNA genes which was reflected by PFGE analysis.

Indexed as

DNA, BacterialElectrophoresis, Gel, Pulsed-FieldGenotyping TechniquesHumansMolecular TypingNeisseriaNeisseriaceae InfectionsPolymerase Chain ReactionRNA, Ribosomal, 16SSequence Analysis, DNADNA, BacterialRNA, Ribosomal, 16S16S rRNA genecommensal Neisseriagenotypingpulsed-field gel electrophoresis

Identifiers

PMID28374932
PMCPMC6817022
OpenAlexW2604479578

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.