Evidence map›Paper›PMID 28374822›Full record

ArticleScientific reports2017

Genome-wide identification of membrane-bound fatty acid desaturase genes in Gossypium hirsutum and their expressions during abiotic stress.

Jiyu Feng, Yating Dong, Wei Liu, Qiuling He, M K Daud, Jinhong Chen, Shuijin Zhu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 56 citations in OpenAlex.

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  16. KeyInternational journal of molecular sciences · 2023
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  18. Comprehensive and evolutionary analysis ofFrontiers in plant science · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Jiyu FengDepartment of Agronomy, Zhejiang University, Hangzhou 310058, China.
Yating DongDepartment of Agronomy, Zhejiang University, Hangzhou 310058, China.
Wei LiuCollege of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.
Qiuling HeDepartment of Agronomy, Zhejiang University, Hangzhou 310058, China.
M K DaudDepartment of Biotechnology and Genetic Engineering, Kohat University of Science and Technology, Kohat 26000, Pakistan.
Jinhong ChenDepartment of Agronomy, Zhejiang University, Hangzhou 310058, China.
Shuijin ZhuDepartment of Agronomy, Zhejiang University, Hangzhou 310058, China.
Zhejiang University · CNHenan Agricultural University · CNKohat University of Science and Technology · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Membrane-bound fatty acid desaturases (FADs) are of great importance and play multiple roles in plant growth and development. In the present study, 39 full-length FAD genes, based on database searches, were identified in tetraploid upland cotton (Gossypium hirsutum L.) and were phylogenetically clustered into four subfamilies. Genomic localization revealed that 34 genes were mapped on 22 chromosomes, and five genes were positioned on the scaffold sequences. The FAD genes of G. hirsutum in the same subfamily had similar gene structures. The structures of paralogous genes were considerably conserved in exons number and introns length. It was suggested that the FAD gene families in G. hirsutum might be duplicated mainly by segmental duplication. Moreover, the FAD genes were differentially expressed in different G. hirsutum tissues in response to different levels of salt and cold stresses, as determined by qRT-PCR analysis. The identification and functional analysis of FAD genes in G. hirsutum may provide more candidate genes for genetic modification.

Indexed as

Chromosomes, PlantConserved SequenceExonsFatty Acid DesaturasesGene DuplicationGene Expression ProfilingGene Expression Regulation, PlantGenome, PlantGossypiumIntronsPhylogenyPlant ProteinsStress, PhysiologicalFatty Acid DesaturasesPlant Proteins

Identifiers

PMID28374822
PMCPMC5379561
OpenAlexW2604435854

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.