Evidence map›Paper›PMID 28374344›Full record

ArticleAMB Express2017

Screening of alginate lyase-excreting microorganisms from the surface of brown algae.

Mingpeng Wang, Lei Chen, Zhaojie Zhang, Xuejiang Wang, Song Qin, Peisheng Yan

Open access · goldAbstract read
In one paragraph

Article in AMB Express, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 39 citations in OpenAlex.

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  15. Multicellular behaviour enables cooperation in microbial cell aggregates.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2019
    Article
  16. Actinobacteria Isolated FromFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Mingpeng WangSchool of Municipal and Environmental Engineering, Harbin Institute of Technology, Harbin, 150090, China.
Lei ChenYantai Institute of Costal Zone Research Chinese Academy of Sciences, 17 Chunhui Road, Yantai, 264003, Shandong province, China.
Zhaojie ZhangDepartment of Zoology and Physiology, University of Wyoming, Laramie, WY, USA.
Xuejiang WangWorldfull Agricultural Science and Technology Co., Ltd, Yantai, 264000, China.
Song QinYantai Institute of Costal Zone Research Chinese Academy of Sciences, 17 Chunhui Road, Yantai, 264003, Shandong province, China. sqin@yic.ac.cn.
Peisheng YanSchool of Municipal and Environmental Engineering, Harbin Institute of Technology, Harbin, 150090, China. yps6@163.com.
Harbin Institute of Technology · CNChinese Academy of Sciences · CNUniversity of Wyoming · USYantai Institute of Coastal Zone Research · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alginate lyase is a biocatalyst that degrades alginate to produce oligosaccharides, which have many bioactive functions and could be used as renewable biofuels. Here we report a simple and sensitive plate assay for screening alginate lyase-excreting microorganisms from brown algae. Brown algae Laminaria japonica, Sargassum horneri and Sargassum siliquatrum were cultured in sterile water. Bacteria growing on the surface of seaweeds were identified and their capacity of excreting alginate lyase was analyzed. A total of 196 strains were recovered from the three different algae samples and 12 different bacterial strains were identified capable of excreting alginate lyases. Sequence analysis of the 16S rRNA gene revealed that these alginate lyase-excreting strains belong to eight genera: Paenibacillus (4/12), Bacillus (2/12), Leclercia (1/12), Isoptericola (1/12), Planomicrobium (1/12), Pseudomonas (1/12), Lysinibacillus (1/12) and Sphingomonas (1/12). Further analysis showed that the LJ-3 strain (Bacillus halosaccharovorans) had the highest enzyme activity. To our best knowledge, this is the first report regarding alginate lyase-excreting strains in Paenibacillus, Planomicrobium and Leclercia. We believe that our method used in this study is relatively easy and reliable for large-scale screening of alginate lyase-excreting microorganisms.

Indexed as

Alginate degradationAlginate lyaseBrown algaeGram’s iodineScreening

Identifiers

PMID28374344
PMCPMC5378567
OpenAlexW2605307773

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.