Evidence map›Paper›PMID 28374061›Full record

ArticleMicrobial ecology2017

Spatio-Temporal Variations of Marine Biofilm Communities Colonizing Artificial Substrata Including Antifouling Coatings in Contrasted French Coastal Environments.

Jean-François Briand, Aude Barani, Cédric Garnier, Karine Réhel, Félix Urvois, Christophe LePoupon, Agnès Bouchez, Didier Debroas, Christine Bressy

Abstract read
PubMed Publisher
In one paragraph

Article in Microbial ecology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 74 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. "Omics" Techniques Used in Marine Biofouling Studies.International journal of molecular sciences · 2023
    Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Jean-François BriandMAPIEM-EA 4323, Université de Toulon, La Garde, France. briand@univ-tln.fr.ORCID 0000-0001-8729-2621
Aude BaraniCNRS/INSU, IRD, Institut Méditerranéen d'Océanologie (MIO), Université d'Aix-Marseille, Université de Toulon, Marseille, France.
Cédric GarnierPROTEE-EA 3819, Université de Toulon, La Garde, France.
Karine RéhelLBCM -EA 3883, IUEM, Université de Bretagne Sud, Lorient, France.
Félix UrvoisMAPIEM-EA 4323, Université de Toulon, La Garde, France.
Christophe LePouponPROTEE-EA 3819, Université de Toulon, La Garde, France.
Agnès BouchezUMR CARRTEL, INRA, Université Savoie Mont Blanc, Thonon-Les-Bains, France.
Didier DebroasLaboratoire "Microorganismes: Génome et Environnement, Clermont Université, Université Blaise Pascal, BP 10448, F-63000, Clermont-Ferrand, France.
Christine BressyMAPIEM-EA 4323, Université de Toulon, La Garde, France.
Université de Toulon · FRCentre National de la Recherche Scientifique · FRUniversité de Bretagne Sud · FRUniversité Savoie Mont Blanc · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Surface colonization in seawater first corresponds to the selection of specific microbial biofilm communities. By coupling flow cytometry, microscopy and high throughput sequencing (HTS, 454 pyrosequencing) with artificial surfaces and environmental analyses, we intend to identify the contribution of biofilm community drivers at two contrasted French sites, one temperate and eutrophic (Lorient, Atlantic coast) and the other at a mesotrophic but highly contaminated bay (Toulon, North-Western Mediterranean Sea). Microbial communities were shaped by high temperatures, salinity and lead at Toulon by but nutrients and DOC at Lorient. Coatings including pyrithione exhibited a significant decrease of their microbial densities except for nanoeukaryotes. Clustering of communities was mainly based on the surface type and secondly the site, whereas seasons appeared of less importance. The in-depth HTS revealed that γ- and α-proteobacteria, but also Bacteroidetes, dominated highly diversified bacterial communities with a relative low β-diversity. Sensitivity to biocides released by the tested antifouling coatings could be noticed at different taxonomic levels: the percentage of Bacteroidetes overall decreased with the presence of pyrithione, whereas the α/γ-proteobacteria ratio decreased at Toulon when increased at Lorient. Small diatom cells (Amphora and Navicula spp.) dominated on all surfaces, whereas site-specific sub-dominant taxa appeared clearly more sensitive to biocides. This overall approach exhibited the critical significance of surface characteristics in biofilm community shaping.

Indexed as

Bacterial Physiological PhenomenaBiofoulingAtlantic OceanBiofilmsDiatomsFlow CytometryFranceMediterranean SeaSeasonsSeawaterSequence Analysis, DNABiofoulingEnvironmental factorsFlow cytometryHigh throughput sequencingMarine biofilmMicrobial ecotoxicology

Identifiers

PMID28374061
OpenAlexW2605375816

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.