Evidence map›Paper›PMID 28374017›Full record

ArticleeNeuro

Nonstationary Stochastic Dynamics Underlie Spontaneous Transitions between Active and Inactive Behavioral States.

Alexandre Melanson, Jorge F Mejias, James J Jun, Leonard Maler, André Longtin

Abstract read
In one paragraph

Article in eNeuro. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. What Is the Readiness Potential?Trends in cognitive sciences · 2021
    Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Alexandre MelansonDepartment of Physics, University of Ottawa , Ottawa, Ontario, Canada , K1N 6N5.
Jorge F MejiasDepartment of Physics, University of Ottawa , Ottawa, Ontario, Canada , K1N 6N5.ORCID 0000-0002-8096-4891
James J JunDepartment of Physics, University of Ottawa , Ottawa, Ontario, Canada , K1N 6N5.
Leonard MalerDepartment of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Ontario, Canada, K1H 8M5; Center for Neural Dynamics, University of Ottawa, Ottawa, Ontario, Canada, K1N 6N5; Brain and Mind Research Institute, Department of Medecine, University of Ottawa, Ottawa, Ontario, Canada, K1H 8M5.ORCID 0000-0001-7666-2754
André LongtinDepartment of Physics, University of Ottawa, Ottawa, Ontario, Canada, K1N 6N5; Center for Neural Dynamics, University of Ottawa, Ottawa, Ontario, Canada, K1N 6N5; Brain and Mind Research Institute, Department of Medecine, University of Ottawa, Ottawa, Ontario, Canada, K1H 8M5.

Funding

CIHR
6 · The paper itself

Abstract

The neural basis of spontaneous movement generation is a fascinating open question. Long-term monitoring of fish, swimming freely in a constant sensory environment, has revealed a sequence of behavioral states that alternate randomly and spontaneously between periods of activity and inactivity. We show that key dynamical features of this sequence are captured by a 1-D diffusion process evolving in a nonlinear double well energy landscape, in which a slow variable modulates the relative depth of the wells. This combination of stochasticity, nonlinearity, and nonstationary forcing correctly captures the vastly different timescales of fluctuations observed in the data (∼1 to ∼1000 s), and yields long-tailed residence time distributions (RTDs) also consistent with the data. In fact, our model provides a simple mechanism for the emergence of long-tailed distributions in spontaneous animal behavior. We interpret the stochastic variable of this dynamical model as a decision-like variable that, upon reaching a threshold, triggers the transition between states. Our main finding is thus the identification of a threshold crossing process as the mechanism governing spontaneous movement initiation and termination, and to infer the presence of underlying nonstationary agents. Another important outcome of our work is a dimensionality reduction scheme that allows similar segments of data to be grouped together. This is done by first extracting geometrical features in the dataset and then applying principal component analysis over the feature space. Our study is novel in its ability to model nonstationary behavioral data over a wide range of timescales.

Indexed as

BehaviorModels, BiologicalAnimalsComputer SimulationElectric FishElectric OrganLocomotionMonte Carlo MethodNonlinear DynamicsStochastic ProcessesTime Factorsbehavioral state transitionsbistabilitycomputer simulationselectric fishspontaneous movementstochastic differential equation

Identifiers

PMID28374017
PMCPMC5370279

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.