Evidence map›Paper›PMID 28373483›Full record

ArticleGenome research2017

Single-molecule sequencing resolves the detailed structure of complex satellite DNA loci in

Daniel E Khost, Danna G Eickbush, Amanda M Larracuente

Abstract read
In one paragraph

Article in Genome research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
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  7. Pervasive suppressors halt the spread of selfishbioRxiv : the preprint server for biology · 2025
    Article
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  10. Review
  11. Article
  12. New perspectives on the causes and consequences of male meiotic drive.Current opinion in genetics & development · 2023
    Review
  13. Article
  14. Comparative analysis of repetitive DNA in dysploid and non-dysploid Phaseolus beans.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2023
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Daniel E KhostDepartment of Biology, University of Rochester, Rochester, New York 14627, USA.
Danna G EickbushDepartment of Biology, University of Rochester, Rochester, New York 14627, USA.
Amanda M LarracuenteDepartment of Biology, University of Rochester, Rochester, New York 14627, USA.ORCID 0000-0001-5944-5686

Funding

The evolutionary and functional genomics of satellite DNAR35GM119515 · NIGMS · UNIVERSITY OF ROCHESTER · PI Amanda Marie Larracuente · 2016 to 2026
$4.0M
NIGMS NIH HHS R35 GM119515
6 · The paper itself

Abstract

Highly repetitive satellite DNA (satDNA) repeats are found in most eukaryotic genomes. SatDNAs are rapidly evolving and have roles in genome stability and chromosome segregation. Their repetitive nature poses a challenge for genome assembly and makes progress on the detailed study of satDNA structure difficult. Here, we use single-molecule sequencing long reads from Pacific Biosciences (PacBio) to determine the detailed structure of all major autosomal complex satDNA loci in

Indexed as

Genetic LociAnimalsContig MappingDNA, SatelliteDrosophila melanogasterSequence Analysis, DNADNA, Satellite

Identifiers

PMID28373483
PMCPMC5411766

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.