Evidence map›Paper›PMID 28373404›Full record

ArticleCancer research2017

Precancer Atlas to Drive Precision Prevention Trials.

Avrum Spira, Matthew B Yurgelun, Ludmil Alexandrov, Anjana Rao, Rafael Bejar, Kornelia Polyak, Marios Giannakis, Ali Shilatifard, Olivera J Finn, Madhav Dhodapkar and 10 more

Open access · greenAbstract read
In one paragraph

Article in Cancer research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed, 1 pooled it
5.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 1 synthesis or guideline pooled it, 132 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Trial
  5. Review
  6. Article
  7. Signaling pathways and targeted interventions for precancers.Signal transduction and targeted therapy · 2026
    Review
  8. Polyclonal origins of human premalignant colorectal lesions.bioRxiv : the preprint server for biology · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Review
  15. Review
  16. Review
  17. Article
  18. On epigenetic stochasticity, entropy and cancer risk.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  19. Article
  20. Review

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 14 institutions in 1 country.

Avrum SpiraDepartment of Medicine, Boston University School of Medicine, Boston, Massachusetts.
Matthew B YurgelunDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Ludmil AlexandrovTheoretical Division, Center for Nonlinear Studies, Los Alamos National Laboratory, Los Alamos, New Mexico.
Anjana RaoDivision of Signaling and Gene Expression, La Jolla Institute for Allergy and Immunology, La Jolla, California.
Rafael BejarDepartment of Medicine, Moores Cancer Center, University of California San Diego, La Jolla, California.
Kornelia PolyakDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Marios GiannakisDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Ali ShilatifardDepartment of Biochemistry and Molecular Genetics, Northwestern University Feinberg School of Medicine, Chicago, Illinois.
Olivera J FinnDepartment of Immunology, University of Pittsburgh, Pittsburgh, Pennsylvania.
Madhav DhodapkarDepartment of Hematology and Immunology, Yale Cancer Center, New Haven, Connecticut.
Neil E KayDepartment of Hematology, Mayo Clinic Hospital, Rochester, Minnesota.
Esteban BraggioDepartment of Hematology, Mayo Clinic Hospital, Phoenix, Arizona.
Eduardo VilarDepartment of Clinical Cancer Prevention, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Sarah A MazzilliDepartment of Medicine, Boston University School of Medicine, Boston, Massachusetts.
Timothy R RebbeckDivision of Hematology and Oncology, Dana-Farber Cancer Institute and Harvard T.H. Chan School of Public Health, Boston, Massachusetts.
Judy E GarberDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Victor E VelculescuDepartment of Oncology, Sidney Kimmel Comprehensive Cancer Center at Johns Hopkins, Baltimore, Maryland.
Mary L DisisDepartment of Medicine, Center for Translational Medicine in Women's Health, University of Washington, Seattle, Washington.
Douglas C WallaceCenter for Mitochondrial and Epigenomic Medicine, Children's Hospital of Philadelphia, University of Pennsylvania, Philadelphia, Pennsylvania.
Scott M LippmanDepartment of Medicine, Moores Cancer Center, University of California San Diego, La Jolla, California. slippman@ucsd.edu.
Dana-Farber Cancer Institute · USBoston University · USUniversity of California San Diego · USChildren's Hospital of Philadelphia · USInstitute of Translational Health Sciences · USLa Jolla Institute for Immunology · USLos Alamos National Laboratory · USMayo Clinic · USMayo Clinic Hospital · USNorthwestern University · USSidney Kimmel Comprehensive Cancer Center · USThe University of Texas MD Anderson Cancer Center · USUniversity of Pittsburgh · USYale Cancer Center · US

Funding

VIRAL MALIGNANCYP30CA023100 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Jesse Nodora · 1985 to 2026
$124.9M
SIGNAL TRANSDUCTION AND GENE INDUCTION IN T LYMPHOCYTESR01AI040127 · NIAID · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI HOGAN, PATRICK, RAO, ANJANA · 1996 to 2025
$13.3M
Integrated Molecular, Cellular, and Imaging Characterization of Screen-Detected Lung CancerU01CA196408 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ABERLE, DENISE R., DUBINETT, STEVEN M. · 2015 to 2021
$7.1M
Large-Scale Genetic Analyses of Human CancerR01CA121113 · NCI · JOHNS HOPKINS UNIVERSITY · PI ANAGNOSTOU, VALSAMO, VELCULESCU, VICTOR E. · 2006 to 2022
$4.3M
The Boston University-UCLA Lung Cancer Biomarker Development LabU01CA214182 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ABERLE, DENISE R., DUBINETT, STEVEN M. · 2016 to 2021
$3.1M
NCI NIH HHS P30 CA023100NCI NIH HHS R01 CA121113NCI NIH HHS U01 CA196408NCI NIH HHS U01 CA214182NIAID NIH HHS R01 AI040127
6 · The paper itself

Abstract

Cancer development is a complex process driven by inherited and acquired molecular and cellular alterations. Prevention is the holy grail of cancer elimination, but making this a reality will take a fundamental rethinking and deep understanding of premalignant biology. In this Perspective, we propose a national concerted effort to create a Precancer Atlas (PCA), integrating multi-omics and immunity - basic tenets of the neoplastic process. The biology of neoplasia caused by germline mutations has led to paradigm-changing precision prevention efforts, including: tumor testing for mismatch repair (MMR) deficiency in Lynch syndrome establishing a new paradigm, combinatorial chemoprevention efficacy in familial adenomatous polyposis (FAP), signal of benefit from imaging-based early detection research in high-germline risk for pancreatic neoplasia, elucidating early ontogeny in

Indexed as

Precision MedicineAnimalsCancer VaccinesCellular MicroenvironmentDNA, MitochondrialEpigenesis, GeneticGenetic Predisposition to DiseaseGenome-Wide Association StudyGerm-Line MutationHigh-Throughput Nucleotide SequencingHumansMitochondriaNeoplasmsPrecancerous ConditionsSingle-Cell AnalysisCancer VaccinesDNA, Mitochondrial

Identifiers

PMID28373404
PMCPMC6681830
OpenAlexW2604434270

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.