Evidence map›Paper›PMID 28369499›Full record

ArticleNucleic acids research2017

High pressure activation of the Mrr restriction endonuclease in Escherichia coli involves tetramer dissociation.

Anaïs C Bourges, Oscar E Torres Montaguth, Anirban Ghosh, Wubishet M Tadesse, Nathalie Declerck, Abram Aertsen, Catherine A Royer

Abstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Anaïs C BourgesDepartment of Biological Sciences, Rensselaer Polytechnic Institute, Troy, NY 12180, USA.
Oscar E Torres MontaguthDepartment of Microbial and Molecular Systems, Laboratory of Food Microbiology, KU Leuven, B-3001 Leuven, Belgium.
Anirban GhoshDepartment of Microbial and Molecular Systems, Laboratory of Food Microbiology, KU Leuven, B-3001 Leuven, Belgium.
Wubishet M TadesseDepartment of Microbial and Molecular Systems, Laboratory of Food Microbiology, KU Leuven, B-3001 Leuven, Belgium.
Nathalie DeclerckCentre de Biochimie Structurale, CNRS UMR5048, INSERM U1054, Université Montpellier, 34000 Montpellier, France.
Abram AertsenDepartment of Microbial and Molecular Systems, Laboratory of Food Microbiology, KU Leuven, B-3001 Leuven, Belgium.
Catherine A RoyerDepartment of Biological Sciences, Rensselaer Polytechnic Institute, Troy, NY 12180, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A sub-lethal hydrostatic pressure (HP) shock of ∼100 MPa elicits a RecA-dependent DNA damage (SOS) response in Escherichia coli K-12, despite the fact that pressure cannot compromise the covalent integrity of DNA. Prior screens for HP resistance identified Mrr (Methylated adenine Recognition and Restriction), a Type IV restriction endonuclease (REase), as instigator for this enigmatic HP-induced SOS response. Type IV REases tend to target modified DNA sites, and E. coli Mrr activity was previously shown to be elicited by expression of the foreign M.HhaII Type II methytransferase (MTase), as well. Here we measured the concentration and stoichiometry of a functional GFP-Mrr fusion protein using in vivo fluorescence fluctuation microscopy. Our results demonstrate that Mrr is a tetramer in unstressed cells, but shifts to a dimer after HP shock or co-expression with M.HhaII. Based on the differences in reversibility of tetramer dissociation observed for wild-type GFP-Mrr and a catalytic mutant upon HP shock compared to M.HhaII expression, we propose a model by which (i) HP triggers Mrr activity by directly pushing inactive Mrr tetramers to dissociate into active Mrr dimers, while (ii) M.HhaII triggers Mrr activity by creating high affinity target sites on the chromosome, which pull the equilibrium from inactive tetrameric Mrr toward active dimer.

Indexed as

PressureProtein MultimerizationBiocatalysisChromatography, GelDNA Restriction EnzymesEnzyme ActivationEscherichia coli K12FluorescenceGreen Fluorescent ProteinsModels, BiologicalMutant ProteinsMutationStress, PhysiologicalDNA Restriction EnzymesGreen Fluorescent ProteinsMutant Proteins

Identifiers

PMID28369499
PMCPMC5435990

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.