Evidence map›Paper›PMID 28369150›Full record

ArticlePloS one2017

Isolation and characterization of Magnetospirillum sp. strain 15-1 as a representative anaerobic toluene-degrader from a constructed wetland model.

Ingrid Meyer-Cifuentes, Paula M Martinez-Lavanchy, Vianey Marin-Cevada, Stefanie Böhnke, Hauke Harms, Jochen A Müller, Hermann J Heipieper

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Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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  7. Draft Genome Sequence ofGenome announcements · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Ingrid Meyer-CifuentesHelmholtz Centre for Environmental Research-UFZ, Department of Environmental Biotechnology, Leipzig, Germany.
Paula M Martinez-LavanchyHelmholtz Centre for Environmental Research-UFZ, Department of Environmental Biotechnology, Leipzig, Germany.
Vianey Marin-CevadaHelmholtz Centre for Environmental Research-UFZ, Department of Environmental Biotechnology, Leipzig, Germany.
Stefanie BöhnkeHelmholtz Centre for Environmental Research-UFZ, Department of Environmental Biotechnology, Leipzig, Germany.
Hauke HarmsHelmholtz Centre for Environmental Research-UFZ, Department of Environmental Microbiology, Leipzig, Germany.
Jochen A MüllerHelmholtz Centre for Environmental Research-UFZ, Department of Environmental Biotechnology, Leipzig, Germany.
Hermann J HeipieperHelmholtz Centre for Environmental Research-UFZ, Department of Environmental Biotechnology, Leipzig, Germany.ORCID http://orcid.org/0000-0002-3723-9600

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Previously, Planted Fixed-Bed Reactors (PFRs) have been used to investigate microbial toluene removal in the rhizosphere of constructed wetlands. Aerobic toluene degradation was predominant in these model systems although bulk redox conditions were hypoxic to anoxic. However, culture-independent approaches indicated also that microbes capable of anaerobic toluene degradation were abundant. Therefore, we aimed at isolating anaerobic-toluene degraders from one of these PFRs. From the obtained colonies which consisted of spirilli-shaped bacteria, a strain designated 15-1 was selected for further investigations. Analysis of its 16S rRNA gene revealed greatest similarity (99%) with toluene-degrading Magnetospirillum sp. TS-6. Isolate 15-1 grew with up to 0.5 mM of toluene under nitrate-reducing conditions. Cells reacted to higher concentrations of toluene by an increase in the degree of saturation of their membrane fatty acids. Strain 15-1 contained key genes for the anaerobic degradation of toluene via benzylsuccinate and subsequently the benzoyl-CoA pathway, namely bssA, encoding for the alpha subunit of benzylsuccinate synthase, bcrC for subunit C of benzoyl-CoA reductase and bamA for 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase. Finally, most members of a clone library of bssA generated from the PFR had highest similarity to bssA from strain 15-1. Our study provides insights about the physiological capacities of a strain of Magnetospirillum isolated from a planted system where active rhizoremediation of toluene is taking place.

Indexed as

RhizosphereWetlandsCarbonCarbon-Carbon LyasesFatty AcidsMagnetospirillumMembrane LipidsNitratesOxygenPhylogenyPlant RootsRNA, Ribosomal, 16SSequence Homology, Amino AcidSoil MicrobiologyTolueneWater Microbiologybenzylsuccinate synthaseCarbonCarbon-Carbon LyasesFatty AcidsMembrane LipidsNitratesOxygenRNA, Ribosomal, 16SToluene

Identifiers

PMID28369150
PMCPMC5378359

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.