Evidence map›Paper›PMID 28369054›Full record

ArticlePLoS genetics2017

Disrupting the cortical actin cytoskeleton points to two distinct mechanisms of yeast [PSI+] prion formation.

Shaun H Speldewinde, Victoria A Doronina, Mick F Tuite, Chris M Grant

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. The Insoluble Protein Deposit (IPOD) in Yeast.Frontiers in molecular neuroscience · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Shaun H SpeldewindeUniversity of Manchester, Faculty of Biology, Medicine and Health, The Michael Smith Building, Manchester, Unted Kindom.
Victoria A DoroninaUniversity of Manchester, Faculty of Biology, Medicine and Health, The Michael Smith Building, Manchester, Unted Kindom.ORCID 0000-0002-2475-3408
Mick F TuiteKent Fungal Group, School of Biosciences, University of Kent, Canterbury, Kent, United Kingdom.
Chris M GrantUniversity of Manchester, Faculty of Biology, Medicine and Health, The Michael Smith Building, Manchester, Unted Kindom.ORCID 0000-0002-0616-6576
University of Manchester · GBUniversity of Kent · GB

Funding

Biotechnology and Biological Sciences Research Council BB/J000183/1Biotechnology and Biological Sciences Research Council BB/J000191/1Wellcome TrustWellcome Trust 099733/Z/12/Z
6 · The paper itself

Abstract

Mammalian and fungal prions arise de novo; however, the mechanism is poorly understood in molecular terms. One strong possibility is that oxidative damage to the non-prion form of a protein may be an important trigger influencing the formation of its heritable prion conformation. We have examined the oxidative stress-induced formation of the yeast [PSI+] prion, which is the altered conformation of the Sup35 translation termination factor. We used tandem affinity purification (TAP) and mass spectrometry to identify the proteins which associate with Sup35 in a tsa1 tsa2 antioxidant mutant to address the mechanism by which Sup35 forms the [PSI+] prion during oxidative stress conditions. This analysis identified several components of the cortical actin cytoskeleton including the Abp1 actin nucleation promoting factor, and we show that deletion of the ABP1 gene abrogates oxidant-induced [PSI+] prion formation. The frequency of spontaneous [PSI+] prion formation can be increased by overexpression of Sup35 since the excess Sup35 increases the probability of forming prion seeds. In contrast to oxidant-induced [PSI+] prion formation, overexpression-induced [PSI+] prion formation was only modestly affected in an abp1 mutant. Furthermore, treating yeast cells with latrunculin A to disrupt the formation of actin cables and patches abrogated oxidant-induced, but not overexpression-induced [PSI+] prion formation, suggesting a mechanistic difference in prion formation. [PIN+], the prion form of Rnq1, localizes to the IPOD (insoluble protein deposit) and is thought to influence the aggregation of other proteins. We show Sup35 becomes oxidized and aggregates during oxidative stress conditions, but does not co-localize with Rnq1 in an abp1 mutant which may account for the reduced frequency of [PSI+] prion formation.

Indexed as

ActinsBridged Bicyclo Compounds, HeterocyclicCytoskeletonMicrofilament ProteinsOxidative StressPeptide Termination FactorsPeroxidasesPrionsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsThiazolidinesABP1 protein, S cerevisiaeActinsBridged Bicyclo Compounds, Heterocycliccoronin proteinslatrunculin AMicrofilament ProteinsPAN1 protein, S cerevisiaePeptide Termination FactorsPeroxidasesPrionsRNQ1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSUP35 protein, S cerevisiaeThiazolidinesTsa1 protein, S cerevisiaeTsa2 protein, S cerevisiae

Identifiers

PMID28369054
PMCPMC5393896
OpenAlexW2605273264

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.