Evidence map›Paper›PMID 28368387›Full record

ArticleNature microbiology2017

Retroelement-guided protein diversification abounds in vast lineages of Bacteria and Archaea.

Blair G Paul, David Burstein, Cindy J Castelle, Sumit Handa, Diego Arambula, Elizabeth Czornyj, Brian C Thomas, Partho Ghosh, Jeff F Miller, Jillian F Banfield and 1 more

Abstract read
In one paragraph

Article in Nature microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed.

  1. Article
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  14. Targeted hypermutation of putative antigen sensors in multicellular bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Diversity-Generating Retroelements in Prokaryotic Immunity.International journal of molecular sciences · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Blair G PaulMarine Science Institute, University of California, Santa Barbara, California 93106, USA.
David BursteinDepartment of Earth and Planetary Science, University of California, Berkeley, California 94720, USA.
Cindy J CastelleDepartment of Earth and Planetary Science, University of California, Berkeley, California 94720, USA.
Sumit HandaDepartment of Chemistry and Biochemistry, UC San Diego, La Jolla, California 92093, USA.
Diego ArambulaDepartment of Microbiology, Immunology and Molecular Genetics, University of California, Los Angeles, California 90095, USA.
Elizabeth CzornyjDepartment of Microbiology, Immunology and Molecular Genetics, University of California, Los Angeles, California 90095, USA.
Brian C ThomasDepartment of Earth and Planetary Science, University of California, Berkeley, California 94720, USA.
Partho GhoshDepartment of Chemistry and Biochemistry, UC San Diego, La Jolla, California 92093, USA.
Jeff F MillerDepartment of Microbiology, Immunology and Molecular Genetics, University of California, Los Angeles, California 90095, USA.
Jillian F BanfieldDepartment of Earth and Planetary Science, University of California, Berkeley, California 94720, USA.
David L ValentineMarine Science Institute, University of California, Santa Barbara, California 93106, USA.ORCID http://orcid.org/0000-0001-5914-9107

Funding

Diversity-Generation and Variable Protein Displays in Pathogens and PhageR01AI096838 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GHOSH, PARTHO, MILLER, JEFFERY F. · 2012 to 2016
$2.7M
NIAID NIH HHS R01 AI096838
6 · The paper itself

Abstract

Major radiations of enigmatic Bacteria and Archaea with large inventories of uncharacterized proteins are a striking feature of the Tree of Life

Indexed as

Evolution, MolecularArchaeaArchaeal ProteinsBacteriaBacterial ProteinsGenome, ArchaealGenome, BacterialGenomicsNanoarchaeotaPhylogenyRetroelementsRNA-Directed DNA PolymeraseArchaeal ProteinsBacterial ProteinsRetroelementsRNA-Directed DNA Polymerase

Identifiers

PMID28368387
PMCPMC5436926

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.