Evidence map›Paper›PMID 28368303›Full record

ArticleViruses2017

Identification of HIV-1 Tat-Associated Proteins Contributing to HIV-1 Transcription and Latency.

Maxime Junior Jean, Derek Power, Weili Kong, Huachao Huang, Netty Santoso, Jian Zhu

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Maxime Junior JeanDepartment of Microbiology and Immunology, University of Rochester Medical Center, Rochester, NY 14642, USA. Maxime_Jean@urmc.rochester.edu.
Derek PowerDepartment of Microbiology and Immunology, University of Rochester Medical Center, Rochester, NY 14642, USA. derekpow@buffalo.edu.
Weili KongDepartment of Microbiology and Immunology, University of Rochester Medical Center, Rochester, NY 14642, USA. Weili_Kong@urmc.rochester.edu.
Huachao HuangDepartment of Microbiology and Immunology, University of Rochester Medical Center, Rochester, NY 14642, USA. Huachao_Huang@urmc.rochester.edu.
Netty SantosoDepartment of Microbiology and Immunology, University of Rochester Medical Center, Rochester, NY 14642, USA. Netty_Santoso@urmc.rochester.edu.
Jian ZhuDepartment of Microbiology and Immunology, University of Rochester Medical Center, Rochester, NY 14642, USA. Jian_Zhu@urmc.rochester.edu.
University of Rochester Medical Center · US

Funding

Virology/Immunology CoreP30AI078498 · NIAID · UNIVERSITY OF ROCHESTER · PI DEWHURST, STEPHEN · 2008 to 2018
$14.6M
Investigation of Latency Promoting Genes (LPGs) in HIV Oral Reservoir CellsR01DE025447 · NIDCR · UNIVERSITY OF ROCHESTER · PI ZHU, JIAN · 2015 to 2019
$1.9M
Cooperation of BRD4 and TAT Associated Proteins in HIV Transcription and LatencyR33AI116180 · NIAID · UNIVERSITY OF ROCHESTER · PI ZHU, JIAN · 2016 to 2018
$1.2M
NIAID NIH HHS P30 AI078498NIAID NIH HHS R33 AI116180NIDCR NIH HHS R01 DE025447
6 · The paper itself

Abstract

Human immunodeficiency virus type 1 (HIV-1) Tat is a virus-encoded trans-activator that plays a central role in viral transcription. We used our recently developed parallel analysis of in vitro translated open reading frames (ORFs) (PLATO) approach to identify host proteins that associate with HIV-1 Tat. From this proteomic assay, we identify 89 Tat-associated proteins (TAPs). We combine our results with other datasets of Tat or long terminal repeat (LTR)-associated proteins. For some of these proteins (NAT10, TINP1, XRCC5, SIN3A), we confirm their strong association with Tat. These TAPs also suppress Tat-mediated HIV-1 transcription. Removing suppression of HIV-1 transcription benefits the reversal of post-integrated, latent HIV-1 proviruses. We demonstrate that these transcriptionally suppressing TAPs contribute to HIV-1 latency in Jurkat latency (J-LAT) cells. Therefore, our proteomic analysis highlights the previously unappreciated TAPs that play a role in maintaining HIV-1 latency and can be further studied as potential pharmacological targets for the "shock and kill" HIV-1 cure strategy.

Indexed as

Host-Pathogen InteractionsTranscription, GeneticVirus LatencyHIV-1HumansJurkat CellsProtein BindingProteometat Gene Products, Human Immunodeficiency VirusProteometat Gene Products, Human Immunodeficiency VirusHIVlatencyPLATOprotein interactionproteomicsribosome displayTattranscription

Identifiers

PMID28368303
PMCPMC5408673
OpenAlexW2604311925

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.