Evidence map›Paper›PMID 28367307›Full record

ArticleMolecular autism2017

Transcriptome analysis of microglia in a mouse model of Rett syndrome: differential expression of genes associated with microglia/macrophage activation and cellular stress.

Dejian Zhao, Ryan Mokhtari, Erika Pedrosa, Rayna Birnbaum, Deyou Zheng, Herbert M Lachman

Open access · goldAbstract read
In one paragraph

Article in Molecular autism, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 66 citations in OpenAlex.

  1. Toward an NGF-based therapy for Rett syndrome.Frontiers in neuroscience · 2026
    Review
  2. Article
  3. Article
  4. Depletion of CD169Frontiers in neuroscience · 2025
    Article
  5. Review
  6. Article
  7. Article
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  11. RIPK1 activation in Mecp2-deficient microglia promotes inflammation and glutamate release in RTT.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Review
  13. Article
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  17. Microglia and Neurodevelopmental Disorders.Annual review of neuroscience · 2022
    Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Dejian Zhao *Department of Genetics, Albert Einstein College of Medicine, 1300 Morris Park Ave., Bronx, NY USA.
Ryan Mokhtari *Department of Psychiatry and Behavioral Sciences, Albert Einstein College of Medicine, 1300 Morris Park Ave., Bronx, NY USA.
Erika PedrosaDepartment of Psychiatry and Behavioral Sciences, Albert Einstein College of Medicine, 1300 Morris Park Ave., Bronx, NY USA.
Rayna BirnbaumDepartment of Psychiatry and Behavioral Sciences, Albert Einstein College of Medicine, 1300 Morris Park Ave., Bronx, NY USA.
Deyou ZhengDepartment of Genetics, Albert Einstein College of Medicine, 1300 Morris Park Ave., Bronx, NY USA.
Herbert M LachmanDepartment of Genetics, Albert Einstein College of Medicine, 1300 Morris Park Ave., Bronx, NY USA.
Albert Einstein College of Medicine · US

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI STEVEN C. ALMO · 1985 to 2026
$111.2M
Translational Neuroimaging CoreP30HD071593 · NICHD · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI WALKLEY, STEVEN UPSHAW · 2011 to 2015
$5.6M
Monoallelic expression in neurons derived from induced pluripotent stem cellsR01MH099427 · NIMH · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI LACHMAN, HERBERT M · 2013 to 2017
$2.1M
Analysis of Glutamatergic Neurons Derived from Patient-Specific iPS CellsR33MH087840 · NIMH · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI LACHMAN, HERBERT M · 2010 to 2011
$814k
Novel regulatory network involving non-coding role of an ASD candidate gene PTENR21MH099452 · NIMH · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI ZHENG, DEYOU · 2012 to 2013
$449k
Analysis of Glutamatergic Neurons Derived from Patient-Specific iPS CellsR21MH087840 · NIMH · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI LACHMAN, HERBERT M · 2009 to 2009
$332k
NCI NIH HHS P30 CA013330NICHD NIH HHS P30 HD071593NIMH NIH HHS R01 MH099427NIMH NIH HHS R21 MH087840NIMH NIH HHS R21 MH099452NIMH NIH HHS R33 MH087840
6 · The paper itself

Abstract

backgroundRett syndrome (RTT) is a severe, neurodevelopmental disorder primarily affecting girls, characterized by progressive loss of cognitive, social, and motor skills after a relatively brief period of typical development. It is usually due to de novo loss of function mutations in the X-linked gene,

methodsIn the current study, we applied whole transcriptome analysis using RNA-seq to gain insight into molecular pathways in microglia that might be dysregulated during the transition, in female mice heterozygous for an

resultsWe found a significant overlap in differentially expressed genes (DEGs) with genes involved in regulating the extracellular matrix, and those that are activated or inhibited when macrophages and microglia are stimulated towards the M1 and M2 activation states. However, the M1- and M2-associated genes were different in the 5- and 24-week samples. In addition, a substantial decrease in the expression of nine members of the heat shock protein (HSP) family was found in the 5-week samples, but not at 24 weeks.

conclusionsThese findings suggest that microglia from pre-phenotypic and phenotypic female mice are activated in a manner different from controls and that pre-phenotypic female mice may have alterations in their capacity to response to heat stress and other stressors that function through the HSP pathway.

Indexed as

AnimalsDisease Models, AnimalFemaleGene Expression ProfilingGene Expression RegulationHeat-Shock ProteinsHumansMacrophage ActivationMacrophagesMethyl-CpG-Binding Protein 2MiceMicrogliaMutationOxidative StressRett SyndromeSequence Analysis, RNAHeat-Shock ProteinsMecp2 protein, mouseMethyl-CpG-Binding Protein 2AutismHeat shockInnate immune systemM1 activationM2 activationMicrogliaRett syndromeSchizophrenia

Identifiers

PMID28367307
PMCPMC5372344
OpenAlexW2598132736

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.