Evidence map›Paper›PMID 28365837›Full record

ArticlePlant molecular biology2017

Comparison of phytohormone levels and transcript profiles during seasonal dormancy transitions in underground adventitious buds of leafy spurge.

Wun S Chao, Münevver Doğramacı, David P Horvath, James V Anderson, Michael E Foley

Abstract read
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In one paragraph

Article in Plant molecular biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
6.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 37 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Wun S ChaoBiosciences Research Lab, USDA-Agricultural Research Service, 1605 Albrecht Boulevard N., Fargo, ND, 58102-2765, USA. wun.chao@ars.usda.gov.
Münevver DoğramacıBiosciences Research Lab, USDA-Agricultural Research Service, 1605 Albrecht Boulevard N., Fargo, ND, 58102-2765, USA.
David P HorvathBiosciences Research Lab, USDA-Agricultural Research Service, 1605 Albrecht Boulevard N., Fargo, ND, 58102-2765, USA.
James V AndersonBiosciences Research Lab, USDA-Agricultural Research Service, 1605 Albrecht Boulevard N., Fargo, ND, 58102-2765, USA.
Michael E FoleyBiosciences Research Lab, USDA-Agricultural Research Service, 1605 Albrecht Boulevard N., Fargo, ND, 58102-2765, USA.
Agricultural Research Service · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Leafy spurge (Euphorbia esula L.) is an herbaceous perennial weed that maintains its perennial growth habit through generation of underground adventitious buds (UABs) on the crown and lateral roots. These UABs undergo seasonal phases of dormancy under natural conditions, namely para-, endo-, and ecodormancy in summer, fall, and winter, respectively. These dormancy phases can also be induced in growth chambers by manipulating photoperiod and temperature. In this study, UABs induced into the three phases of dormancy under controlled conditions were used to compare changes in phytohormone and transcriptome profiles. Results indicated that relatively high levels of ABA, the ABA metabolite PA, and IAA were found in paradormant buds. When UABs transitioned from para- to endodormancy, ABA and PA levels decreased, whereas IAA levels were maintained. Additionally, transcript profiles associated with regulation of soluble sugars and ethylene activities were also increased during para- to endodormancy transition, which may play some role in maintaining endodormancy status. When crown buds transitioned from endo- to ecodormancy, the ABA metabolites PA and DPA decreased significantly along with the down-regulation of ABA biosynthesis genes, ABA2 and NCED3. IAA levels were also significantly lower in ecodormant buds than that of endodormant buds. We hypothesize that extended cold treatment may trigger physiological stress in endodormant buds, and that these stress-associated signals induced the endo- to ecodormancy transition and growth competence. The up-regulation of NAD/NADH phosphorylation and dephosphorylation pathway, and MAF3-like and GRFs genes, may be considered as markers of growth competency.

Indexed as

SeasonsTranscriptomeEuphorbiaGene Expression Regulation, PlantPlant DormancyPlant Growth RegulatorsPlant ProteinsPlant Growth RegulatorsPlant ProteinsDormancyHormone profilingLeafy spurgeRNAseq

Identifiers

PMID28365837
OpenAlexW2599919637

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.