Evidence map›Paper›PMID 28364549›Full record

ArticleBrain : a journal of neurology2017

Deleterious variants in TRAK1 disrupt mitochondrial movement and cause fatal encephalopathy.

Ortal Barel, May Christine V Malicdan, Bruria Ben-Zeev, Judith Kandel, Hadass Pri-Chen, Joshi Stephen, Inês G Castro, Jeremy Metz, Osama Atawa, Sharon Moshkovitz and 24 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Brain : a journal of neurology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 37 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 1 pooled it
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 1 synthesis or guideline pooled it, 63 citations in OpenAlex.

  1. Pooled it
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  7. Article
  8. Role ofFrontiers in molecular neuroscience · 2024
    Article
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  14. Regulation of peroxisomal trafficking and distribution.Cellular and molecular life sciences : CMLS · 2021
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

34 authors at 9 institutions in 3 countries.

Ortal BarelSheba Cancer Research Center, Sheba Medical Center, Tel-Hashomer, Israel.
May Christine V MalicdanMedical Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland, USA.
Bruria Ben-ZeevThe Wohl Institute for Translational Medicine, Sheba Medical Center, Tel-Hashomer, Israel.
Judith KandelDepartment of Bioengineering, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Hadass Pri-ChenMedical Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland, USA.
Joshi StephenMedical Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland, USA.
Inês G CastroDepartment of Biosciences, College of Life and Environmental Sciences, University of Exeter, Exeter, UK.
Jeremy MetzDepartment of Biosciences, College of Life and Environmental Sciences, University of Exeter, Exeter, UK.
Osama AtawaPalestenian Red Crescent Society Hospital, Department of Pediatrics, Hebron City, Palestine.
Sharon MoshkovitzSheba Cancer Research Center, Sheba Medical Center, Tel-Hashomer, Israel.
Esther GanelinSackler Faculty of Medicine, Tel-Aviv University, Tel-Aviv, Israel.
Iris BarshackSackler Faculty of Medicine, Tel-Aviv University, Tel-Aviv, Israel.
Sylvie Polak-CharconSackler Faculty of Medicine, Tel-Aviv University, Tel-Aviv, Israel.
Dvora NassSackler Faculty of Medicine, Tel-Aviv University, Tel-Aviv, Israel.
Dina Marek-YagelThe Wohl Institute for Translational Medicine, Sheba Medical Center, Tel-Hashomer, Israel.
Ninette AmariglioSheba Cancer Research Center, Sheba Medical Center, Tel-Hashomer, Israel.
Nechama ShalvaSackler Faculty of Medicine, Tel-Aviv University, Tel-Aviv, Israel.
Thierry VilbouxMedical Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland, USA.
Carlos FerreiraMedical Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland, USA.
Ben Pode-ShakkedSackler Faculty of Medicine, Tel-Aviv University, Tel-Aviv, Israel.
Gali HeimerSackler Faculty of Medicine, Tel-Aviv University, Tel-Aviv, Israel.
Chen HoffmannSackler Faculty of Medicine, Tel-Aviv University, Tel-Aviv, Israel.
Tal YardeniCenter for Mitochondrial and Epigenomic Medicine, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Andreea NissenkornSackler Faculty of Medicine, Tel-Aviv University, Tel-Aviv, Israel.
Camila AviviDepartment of Pathology, Sheba Medical Center, Tel-Hashomer, Israel.
Eran EyalSheba Cancer Research Center, Sheba Medical Center, Tel-Hashomer, Israel.
Nitzan KolSheba Cancer Research Center, Sheba Medical Center, Tel-Hashomer, Israel.
Efrat Glick SaarSheba Cancer Research Center, Sheba Medical Center, Tel-Hashomer, Israel.
Douglas C WallaceCenter for Mitochondrial and Epigenomic Medicine, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
William A GahlMedical Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland, USA.
Gideon RechaviSheba Cancer Research Center, Sheba Medical Center, Tel-Hashomer, Israel.
Michael SchraderDepartment of Biosciences, College of Life and Environmental Sciences, University of Exeter, Exeter, UK.
David M EckmannDepartment of Bioengineering, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Yair AniksterThe Wohl Institute for Translational Medicine, Sheba Medical Center, Tel-Hashomer, Israel.
Sheba Medical Center · ILTel Aviv University · ILEdmond and Lily Safra Children's Hospital · ILNational Human Genome Research Institute · USUniversity of Exeter · GBChildren's Hospital of Philadelphia · USUniversity of Pennsylvania · USChildren's National · USInova Health System · US

Funding

NHGRI/DIR Clinical Support ServicesZIDHG200352 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI SOLOMON, BENJAMIN · 2009 to 2025
$182.8M
Human Biochemical GeneticsZIAHG000215 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI GAHL, WILLIAM · 2009 to 2025
$72.6M
Mouse models for mitochondrial disorders caused by mutations in mtDNAR01OD010944 · OD · UNIVERSITY OF SOUTH ALABAMA · PI ALEXEYEV, MIKHAIL F., WALLACE, DOUGLAS C · 2012 to 2020
$2.6M
Biotechnology and Biological Sciences Research Council BB/K006231/1NIH HHS R01 OD010944Wellcome TrustWellcome Trust WT097835MFWellcome Trust WT105618MA
6 · The paper itself

Abstract

Cellular distribution and dynamics of mitochondria are regulated by several motor proteins and a microtubule network. In neurons, mitochondrial trafficking is crucial because of high energy needs and calcium ion buffering along axons to synapses during neurotransmission. The trafficking kinesin proteins (TRAKs) are well characterized for their role in lysosomal and mitochondrial trafficking in cells, especially neurons. Using whole exome sequencing, we identified homozygous truncating variants in TRAK1 (NM_001042646:c.287-2A > C), in six lethal encephalopathic patients from three unrelated families. The pathogenic variant results in aberrant splicing and significantly reduced gene expression at the RNA and protein levels. In comparison with normal cells, TRAK1-deficient fibroblasts showed irregular mitochondrial distribution, altered mitochondrial motility, reduced mitochondrial membrane potential, and diminished mitochondrial respiration. This study confirms the role of TRAK1 in mitochondrial dynamics and constitutes the first report of this gene in association with a severe neurodevelopmental disorder.

Indexed as

Adaptor Proteins, Vesicular TransportBrain DiseasesCells, CulturedChild, PreschoolConsanguinityFamily HealthFemaleFibroblastsGenetic Association StudiesGreen Fluorescent ProteinsHumansInfantMagnetic Resonance ImagingMaleMitochondriaMitochondrial DynamicsAdaptor Proteins, Vesicular TransportGreen Fluorescent ProteinsTRAK1 protein, humanearly-onset epilepsymitochondria transportneurodegenerationrare diseasesTRAK1

Identifiers

PMID28364549
PMCPMC6075218
OpenAlexW2603655183

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.