Evidence map›Paper›PMID 28362841›Full record

ArticlePloS one2017

Alteration of the α1β2/α2β1 subunit interface contributes to the increased hemoglobin-oxygen affinity of high-altitude deer mice.

Noriko Inoguchi, Nobuhiro Mizuno, Seiki Baba, Takashi Kumasaka, Chandrasekhar Natarajan, Jay F Storz, Hideaki Moriyama

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Crystal structure of hemoglobin from mouse (Mus musculus) compared with those from other small animals and humans.Acta crystallographica. Section F, Structural biology communications · 2021
    Article
  2. Acclimatization of low altitude-bred deer mice ( Peromyscus maniculatus) to high altitude.Journal of applied physiology (Bethesda, Md. : 1985) · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Noriko InoguchiSchool of Biological Sciences, University of Nebraska, Lincoln, Nebraska, United States of America.
Nobuhiro MizunoProtein Crystal Analysis Division, Japan Synchrotron Radiation Research Institute, Sayo, Japan.
Seiki BabaProtein Crystal Analysis Division, Japan Synchrotron Radiation Research Institute, Sayo, Japan.
Takashi KumasakaProtein Crystal Analysis Division, Japan Synchrotron Radiation Research Institute, Sayo, Japan.
Chandrasekhar NatarajanSchool of Biological Sciences, University of Nebraska, Lincoln, Nebraska, United States of America.
Jay F StorzSchool of Biological Sciences, University of Nebraska, Lincoln, Nebraska, United States of America.
Hideaki MoriyamaSchool of Biological Sciences, University of Nebraska, Lincoln, Nebraska, United States of America.ORCID http://orcid.org/0000-0001-7815-1181

Funding

Mutational Pleiotropy, Epistasis, and the Adaptive Evolution of Hemoglobin FunctionR01HL087216 · NHLBI · UNIVERSITY OF NEBRASKA LINCOLN · PI STORZ, JAY · 2008 to 2021
$4.5M
BioCARS: A Synchrotron Structure Biology ResourceR24GM111072 · NIGMS · UNIVERSITY OF CHICAGO · PI MOFFAT, JOHN KEITH · 2013 to 2016
$2.3M
NHLBI NIH HHS R01 HL087216NIGMS NIH HHS R24 GM111072
6 · The paper itself

Abstract

backgroundDeer mice (Peromyscus maniculatus) that are native to high altitudes in the Rocky Mountains have evolved hemoglobins with an increased oxygen-binding affinity relative to those of lowland conspecifics. To elucidate the molecular mechanisms responsible for the evolved increase in hemoglobin-oxygen affinity, the crystal structure of the highland hemoglobin variant was solved and compared with the previously reported structure for the lowland variant.

resultsHighland hemoglobin yielded at least two crystal types, in which the longest axes were 507 and 230 Å. Using the smaller unit cell crystal, the structure was solved at 2.2 Å resolution. The asymmetric unit contained two tetrameric hemoglobin molecules.

conclusionsThe analyses revealed that αPro50 in the highland hemoglobin variant promoted a stable interaction between αHis45 and heme that was not seen in the αHis50 lowland variant. The αPro50 mutation also altered the nature of atomic contacts at the α1β2/α2β1 intersubunit interfaces. These results demonstrate how affinity-altering changes in intersubunit interactions can be produced by mutations at structurally remote sites.

Indexed as

AltitudeAmino Acid SequenceAnimalsCrystallography, X-RayHemoglobinsHumansMolecular Sequence DataMutationOxygenPeromyscusProtein BindingProtein Structure, SecondarySequence Homology, Amino AcidX-Ray DiffractionHemoglobinsOxygen

Identifiers

PMID28362841
PMCPMC5376325

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.