Evidence map›Paper›PMID 28361821›Full record

ArticleThe Indian journal of medical research2016

Candidate genes for alcohol dependence: A genetic association study from India.

Savita Malhotra, Debasish Basu, Madhu Khullar, Abhishek Ghosh, Neera Chugh

Open access · diamondAbstract read
In one paragraph

Article in The Indian journal of medical research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

  1. Pooled it
  2. Genetic Architecture of Alcohol Use Disorder in Nepal.medRxiv : the preprint server for health sciences · 2025
    Article
  3. Alcohol use disorder research in India: An update.Indian journal of psychiatry · 2024
    Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. GABAPsychopharmacology · 2018
    Review
  10. Article
  11. Need for power in genetic explorations of alcoholism in India.The Indian journal of medical research · 2016
    Article
  12. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Savita MalhotraDepartment of Psychiatry, Postgraduate Institute of Medical Education & Research, Chandigarh, India.
Debasish BasuDepartment of Psychiatry, Postgraduate Institute of Medical Education & Research, Chandigarh, India.
Madhu KhullarDepartment of Experimental Medicine & Biotechnology, Postgraduate Institute of Medical Education & Research, Chandigarh, India.
Abhishek GhoshDepartment of Psychiatry, Postgraduate Institute of Medical Education & Research, Chandigarh, India.
Neera ChughReliance Industries Limited, Navi Mumbai, India.
Post Graduate Institute of Medical Education and Research · INReliance Industries (India) · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND &

objectivesSearch for candidate genes for alcohol dependence (AD) has been inconsistent and inconclusive. Moreover, most of the research has been confined to a few specific ethnic groups. Hence, the aim of our study was to explore specific candidate genes for AD in north Indian male population.

methodsIn this clinic-based genetic association study, 210 males with AD and 200 controls matched for age, gender and ethnicity were recruited from the clinic and the general population, respectively. Cases were diagnosed with Semi-structured Assessment for Genetics of Alcoholism-II (SSAGA-II). Single-nucleotide polymorphism genotyping was done by real-time quantitative-polymerase chain reaction (PCR) using Taq Man assay (ABI 7500) fast real-time PCR system.

resultsBoth at the genotypic level and at allelic frequency, Met158 variant of catechol-O-methyl transferase (COMT) showed significant increase in cases as compared to controls. The frequency of heterozygous genotype (A/G) of gamma-aminobutyric acid receptor A1 (GABRA1) was significantly lower in cases as compared to controls. Likewise, for GABRA2, the frequency of homozygous recessive genotype (G/G) was significantly higher in the control group. With respect to the 5-hydroxytryptamine (5HT) transporter long promoter region (5HTTLPR), cholinergic receptor muscarinic (CHRM2) and alcohol dehydrogenase 1B (ADH1B) genes, there was no significant difference between the cases and the controls. Aldehyde dehydrogenase (ALDH2) gene was found to be monomorphic in our study population. INTERPRETATION &

conclusionsOur study findings showed COMT polymorphism conferring risk and GABRA polymorphism as a protective genotype for Indian male with AD. Genes for alcohol metabolism, serotonin transporter and cholinergic receptor gene polymorphism were perhaps not contributory to AD for Indian population.

Indexed as

AdultAlcohol DehydrogenaseAlcoholismAldehyde Dehydrogenase, MitochondrialAsian PeopleCatechol O-MethyltransferaseGenetic Association StudiesGenetic Predisposition to DiseaseGenotypeHumansIndiaMaleMiddle AgedPolymorphism, Single NucleotideReceptor, Muscarinic M2Receptors, GABA-AADH1B protein, humanAlcohol DehydrogenaseAldehyde Dehydrogenase, MitochondrialALDH2 protein, humanCatechol O-MethyltransferaseCHRM2 protein, humanCOMT protein, humanGABRA1 protein, humanGABRA2 protein, humanReceptor, Muscarinic M2Receptors, GABA-ASerotonin

Identifiers

PMID28361821
PMCPMC5393079
OpenAlexW2599797836

What OpenQuestion holds

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LicenceCC BY-NC-SA
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.