Evidence map›Paper›PMID 28358900›Full record

ArticlePloS one2017

Detection of Pneumocystis jirovecii in oral wash from immunosuppressed patients as a diagnostic tool.

Cecilie Juul Hviid, Marianne Lund, Allan Sørensen, Svend Ellermann-Eriksen, Bente Jespersen, Mette Yde Dam, Jens Frederik Dahlerup, Thomas Benfield, Sanne Jespersen, Lars Jørgen Østergaard and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. An overview of the laboratory diagnosis ofJournal of clinical microbiology · 2025
    Review
  4. Article
  5. Prevalence ofMicroorganisms · 2023
    Article
  6. Invasive Fungal Diseases in Africa: A Critical Literature Review.Journal of fungi (Basel, Switzerland) · 2022
    Article
  7. Is It Possible to DifferentiateJournal of fungi (Basel, Switzerland) · 2021
    Article
  8. Review
  9. Molecular Diagnosis ofJournal of clinical microbiology · 2019
    Article
  10. Review
  11. Frontiers in pediatrics · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Cecilie Juul HviidDepartment of Infectious Diseases, Aarhus University Hospital, Aarhus, Denmark.
Marianne LundDepartment of Clinical Microbiology, Aarhus University Hospital, Aarhus, Denmark.
Allan SørensenThe Bissau HIV Cohort Study Group, Bandim Health Project, Bissau, Guinea Bissau.
Svend Ellermann-EriksenDepartment of Clinical Microbiology, Aarhus University Hospital, Aarhus, Denmark.
Bente JespersenDepartment of Nephrology, Aarhus University Hospital, Aarhus, Denmark.
Mette Yde DamDepartment of Rheumatology, Aarhus University Hospital, Aarhus, Denmark.
Jens Frederik DahlerupDepartment of Hepatology and Gastroenterology, Aarhus Aarhus University Hospital, Denmark.
Thomas BenfieldDepartment of Infectious Diseases, Hvidovre Hospital, Hvidovre, Denmark.
Sanne JespersenDepartment of Infectious Diseases, Aarhus University Hospital, Aarhus, Denmark.
Lars Jørgen ØstergaardDepartment of Infectious Diseases, Aarhus University Hospital, Aarhus, Denmark.
Alex Lund LaursenDepartment of Infectious Diseases, Aarhus University Hospital, Aarhus, Denmark.
Bissau HIV cohort study group
Aarhus University Hospital · DKBandim Health Project · GWHvidovre Hospital · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDiagnosis of Pneumocystis jirovecii (PJ) pneumonia ordinarily requires invasive procedures that could be avoided by PCR methodologies, if these could be designed with adequate cut-off values for confounding background carriage.

methodsWe designed a novel quantitative real-time PCR assay to detect the mitochondrial large subunit rRNA gene of PJ in oral washes. To benchmark levels of PJ carriage versus infection, we tested asymptomatic immunosuppressed patients including Danish (n = 88) and West African HIV-infected (n = 142) patients, renal transplant recipients (n = 51), rheumatologic patients (n = 102), patients with inflammatory bowel diseases (n = 98), and healthy blood donors (controls, n = 50). The fungal burden in patients with PJ pneumonia (PCP, n = 7) was also investigated.

resultsDanish HIV-infected patients (with viremia/low CD4) and recent transplant recipients were at most risk of being carriers (prevalence of 23% and 16.7% respectively), whereas PJ was rarely detected among rheumatologic patients, patients with inflammatory bowel diseases, and untreated West African HIV patients. PJ was not detected among healthy controls. The fungal burden in patients with PCP fell rapidly on treatment.

conclusionsThe quantitative PCR method described could conceivably discriminate between carriage and disease, given suitable threshold values for the former, and predict treatment efficacy by measures of the fungal burden in daily oral washes.

Indexed as

AdultAfrica, WesternDenmarkDNA, FungalHIV InfectionsHumansImmunocompromised HostKidney TransplantationMaleMiddle AgedPneumocystis cariniiPneumonia, PneumocystisDNA, Fungal

Identifiers

PMID28358900
PMCPMC5373571
OpenAlexW2599094866

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.