Evidence map›Paper›PMID 28358347›Full record

ArticleBiology2017

The Enzymology of 2-Hydroxyglutarate, 2-Hydroxyglutaramate and 2-Hydroxysuccinamate and Their Relationship to Oncometabolites.

Vivek A Hariharan, Travis T Denton, Sarah Paraszcszak, Kyle McEvoy, Thomas M Jeitner, Boris F Krasnikov, Arthur J L Cooper

Open access · goldAbstract read
In one paragraph

Article in Biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Review
  6. Preparative Biocatalytic Synthesis of α-Ketoglutaramate.International journal of molecular sciences · 2021
    Article
  7. 2-Hydroxyglutarate in Cancer Cells.Antioxidants & redox signaling · 2020
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Vivek A HariharanDepartment of Biochemistry and Molecular Biology, New York Medical College, Valhalla, NY 10590, USA. hariharanviv@gmail.com.
Travis T DentonDepartment of Pharmaceutical Sciences, Washington State University, College of Pharmacy, Spokane, WA 99210-1495, USA. travis.denton@wsu.edu.
Sarah ParaszcszakDepartment of Biochemistry and Molecular Biology, New York Medical College, Valhalla, NY 10590, USA. sparaszczak@umass.edu.
Kyle McEvoyDepartment of Biochemistry and Molecular Biology, New York Medical College, Valhalla, NY 10590, USA. kyle_mcevoy@nymc.edu.
Thomas M JeitnerDepartment of Biochemistry and Molecular Biology, New York Medical College, Valhalla, NY 10590, USA. thomas_jeitner@nymc.edu.
Boris F KrasnikovDepartment of Biochemistry and Molecular Biology, New York Medical College, Valhalla, NY 10590, USA. boris_krasnikov@nymc.edu.
Arthur J L CooperDepartment of Biochemistry and Molecular Biology, New York Medical College, Valhalla, NY 10590, USA. arthur_cooper@nymc.edu.
New York Medical College · USWashington State University Spokane · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many enzymes make "mistakes". Consequently, repair enzymes have evolved to correct these mistakes. For example, lactate dehydrogenase (LDH) and mitochondrial malate dehydrogenase (mMDH) slowly catalyze the reduction of 2-oxoglutarate (2-OG) to the oncometabolite l-2-hydroxyglutarate (l-2-HG). l-2-HG dehydrogenase corrects this error by converting l-2-HG to 2-OG. LDH also catalyzes the reduction of the oxo group of 2-oxoglutaramate (2-OGM; transamination product of l-glutamine). We show here that human glutamine synthetase (GS) catalyzes the amidation of the terminal carboxyl of both the l- and d- isomers of 2-HG. The reaction of 2-OGM with LDH and the reaction of l-2-HG with GS generate l-2-hydroxyglutaramate (l-2-HGM). We also show that l-2-HGM is a substrate of human ω-amidase. The product (l-2-HG) can then be converted to 2-OG by l-2-HG dehydrogenase. Previous work showed that 2-oxosuccinamate (2-OSM; transamination product of l-asparagine) is an excellent substrate of LDH. Finally, we also show that human ω-amidase converts the product of this reaction (i.e., l-2-hydroxysuccinamate; l-2-HSM) to l-malate. Thus, ω-amidase may act together with hydroxyglutarate dehydrogenases to repair certain "mistakes" of GS and LDH. The present findings suggest that non-productive pathways for nitrogen metabolism occur in mammalian tissues in vivo. Perturbations of these pathways may contribute to symptoms associated with hydroxyglutaric acidurias and to tumor progression. Finally, methods for the synthesis of l-2-HGM and l-2-HSM are described that should be useful in determining the roles of ω-amidase/4- and 5-C compounds in photorespiration in plants.

Indexed as

2-hydroxyglutaramate2-hydroxyglutarate2-hydroxysuccinamate2-oxoglutaramate2-oxoglutarateasparagine transaminaseglutamine synthetaseglutamine transaminasesω-Amidase

Identifiers

PMID28358347
PMCPMC5485471
OpenAlexW2602101082

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.