Evidence map›Paper›PMID 28358281›Full record

ReviewEpigenetics2017

DNA methylation aberrancies as a guide for surveillance and treatment of human cancers.

Gangning Liang, Daniel J Weisenberger

Open access · bronzeAbstract readReview
In one paragraph

Review in Epigenetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed
6.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 128 citations in OpenAlex.

  1. Article
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  5. Review
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  15. Global analysis of DNA methylation changes during experimented lingual carcinogenesis.Hua xi kou qiang yi xue za zhi = Huaxi kouqiang yixue zazhi = West China journal of stomatology · 2024
    Article
  16. Article
  17. Review
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  19. Review
  20. Review

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Gangning Lianga Department of Urology , University of Southern California, USC Norris Comprehensive Cancer Center , Los Angeles , CA , USA.
Daniel J Weisenbergerb Department of Biochemistry and Molecular Medicine , University of Southern California, USC Norris Comprehensive Cancer Center , Los Angeles , CA , USA.
University of Southern California · US

Funding

USC/NORRIS COMPREHENSIVE CANCER CENTER (CORE) SUPPORTP30CA014089 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Fumito Ito · 1985 to 2026
$181.4M
DE NOVO DNA METHYLATION IN BLADDER CANCERR01CA083867 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI JONES, PETER A, LIANG, GANGNING · 2000 to 2014
$4.7M
Epigentic Alterations in Pre-malignant Tissue of the BladderR01CA124518 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI LIANG, GANGNING · 2008 to 2012
$1.3M
Using DNA methylation markers to improve the predictive accuracy and utility of needle biopsiesfor determining prostate cancer aggressivenessR21CA201865 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI GILL, INDERBIR, LIANG, GANGNING · 2016 to 2017
$395k
Identification of a sensitive and specific panel of DNA methylated markers to impR21CA167367 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI LIANG, GANGNING · 2012 to 2013
$382k
NCI NIH HHS P30 CA014089NCI NIH HHS R01 CA124518NCI NIH HHS R21 CA167367NCI NIH HHS R21 CA201865
6 · The paper itself

Abstract

DNA methylation aberrancies are hallmarks of human cancers and are characterized by global DNA hypomethylation of repetitive elements and non-CpG rich regions concomitant with locus-specific DNA hypermethylation. DNA methylation changes may result in altered gene expression profiles, most notably the silencing of tumor suppressors, microRNAs, endogenous retorviruses and tumor antigens due to promoter DNA hypermethylation, as well as oncogene upregulation due to gene-body DNA hypermethylation. Here, we review DNA methylation aberrancies in human cancers, their use in cancer surveillance and the interplay between DNA methylation and histone modifications in gene regulation. We also summarize DNA methylation inhibitors and their therapeutic effects in cancer treatment. In this context, we describe the integration of DNA methylation inhibitors with conventional chemotherapies, DNA repair inhibitors and immune-based therapies, to bring the epigenome closer to its normal state and increase sensitivity to other therapeutic agents to improve patient outcome and survival.

Indexed as

Epigenesis, GeneticChromatinCpG IslandsDNA MethylationGene Expression Regulation, NeoplasticGenes, Tumor SuppressorHumansImmunotherapyMicroRNAsNeoplasmsPromoter Regions, GeneticChromatinMicroRNAsCancerchromatinDNA demethylationDNA methylationDNA methylation inhibitors and epigenetic therapyDNA methyltransferasehistone modificationTET

Identifiers

PMID28358281
PMCPMC5501209
OpenAlexW2603566939

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.