Evidence map›Paper›PMID 28356563›Full record

ArticleJournal of human genetics2017

Homozygous p.(Glu87Lys) variant in ISCA1 is associated with a multiple mitochondrial dysfunctions syndrome.

Anju Shukla, Malavika Hebbar, Anshika Srivastava, Rajagopal Kadavigere, Priyanka Upadhyai, Anil Kanthi, Oliver Brandau, Stephanie Bielas, Katta M Girisha

Open access · greenAbstract readCase Reports
In one paragraph

Article in Journal of human genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 60 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Anju ShuklaDepartment of Medical Genetics, Kasturba Medical College, Manipal University, Manipal, India.
Malavika HebbarDepartment of Medical Genetics, Kasturba Medical College, Manipal University, Manipal, India.
Anshika SrivastavaDepartment of Human Genetics, University of Michigan, Ann Arbor, MI, USA.
Rajagopal KadavigereDepartment of Radiodiagnosis and Imaging, Kasturba Medical College, Manipal, India.
Priyanka UpadhyaiDepartment of Medical Genetics, Kasturba Medical College, Manipal University, Manipal, India.
Anil KanthiDepartment of Medical Genetics, Kasturba Medical College, Manipal University, Manipal, India.
Oliver BrandauCentogene AG, Rostock, Germany.
Stephanie BielasDepartment of Human Genetics, University of Michigan, Ann Arbor, MI, USA.
Katta M GirishaDepartment of Medical Genetics, Kasturba Medical College, Manipal University, Manipal, India.
Manipal Academy of Higher Education · INKasturba Medical College, Manipal · INUniversity of Michigan–Ann Arbor · USCentogene (Germany) · DE

Funding

Genetic Diagnosis of Heritable Neurodevelopmental Disorders with Exome SequencingR21NS094047 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BIELAS, STEPHANIE LEE · 2015 to 2016
$341k
NINDS NIH HHS R21 NS094047
6 · The paper itself

Abstract

The iron-sulfur (Fe-S) cluster (ISC) biogenesis pathway is indispensable for many fundamental biological processes and pathogenic variations in genes encoding several components of the Fe-S biogenesis machinery, such as NFU1, BOLA3, IBA57 and ISCA2 are already implicated in causing four types of multiple mitochondrial dysfunctions syndromes (MMDS). We report on two unrelated families, with two affected children each with early onset neurological deterioration, seizures, extensive white matter abnormalities, cortical migrational abnormalities, lactic acidosis and early demise. Exome sequencing of two affected individuals, one from each family, revealed a homozygous c.259G>A [p.(Glu87Lys)] variant in ISCA1 and Mendelian segregation was confirmed in both families. The ISCA1 variant lies in the only shared region of homozygosity between the two families suggesting the possibility of a founder effect. In silico functional analyses and structural modeling of the protein predict the identified ISCA1 variant to be detrimental to protein stability and function. Notably the phenotype observed in all affected subjects with the ISCA1 pathogenic variant is similar to that previously described in all four types of MMDS. Our findings suggest association of a pathogenic variant in ISCA1 with another MMDS.

Indexed as

Genetic Predisposition to DiseaseAmino Acid SequenceBase SequenceChild, PreschoolFatal OutcomeFemaleHomozygoteHumansInfantIron-Sulfur ProteinsMaleMitochondriaMitochondrial ProteinsMutationPedigreeSyndromeIron-Sulfur ProteinsISCA1 protein, humanMitochondrial Proteins

Identifiers

PMID28356563
PMCPMC5484744
OpenAlexW2598361823

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.