Evidence map›Paper›PMID 28356515›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Identification of targets of tumor suppressor microRNA-34a using a reporter library system.

Yoshiaki Ito, Atsushi Inoue, Timothy Seers, Yukari Hato, Arisa Igarashi, Tatsuya Toyama, Konstantin D Taganov, Mark P Boldin, Hiroshi Asahara

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 50 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. MicroRNA Targeting.Methods in molecular biology (Clifton, N.J.) · 2022
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. The miRNA: a small but powerful RNA for COVID-19.Briefings in bioinformatics · 2021
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 3 countries.

Yoshiaki ItoDepartment of Systems BioMedicine, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University (TMDU), Bunkyo, Tokyo 113-8519, Japan.
Atsushi InoueDepartment of Systems BioMedicine, National Research Institute for Child Health and Development, Setagaya, Tokyo 157-8535, Japan.
Timothy SeersDepartment of Systems BioMedicine, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University (TMDU), Bunkyo, Tokyo 113-8519, Japan.
Yukari HatoDepartment of Breast Surgery, Nagoya City University Graduate School of Medical Sciences, Nagoya, Aichi 467-8601, Japan.
Arisa IgarashiDepartment of Systems BioMedicine, National Research Institute for Child Health and Development, Setagaya, Tokyo 157-8535, Japan.
Tatsuya ToyamaDepartment of Breast Surgery, Nagoya City University Graduate School of Medical Sciences, Nagoya, Aichi 467-8601, Japan.
Konstantin D TaganovDivision of Biology, California Institute of Technology, Pasadena, CA 91125.
Mark P BoldinDepartment of Molecular and Cellular Biology, Beckman Research Institute, City of Hope, Duarte, CA 91010.
Hiroshi AsaharaDepartment of Systems BioMedicine, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University (TMDU), Bunkyo, Tokyo 113-8519, Japan; asahara.syst@tmd.ac.jp.
Nagoya City University · JPNational Center For Child Health and Development · JPCalifornia Institute of Technology · USCity of Hope · USImperial College London · GBJapan Agency for Medical Research and Development · JPTokyo Medical and Dental University · JP

Funding

Transcriptional Regulation of ChondrogenesisR01AR050631 · NIAMS · SCRIPPS RESEARCH INSTITUTE, THE · PI ASAHARA, HIROSHI · 2004 to 2021
$5.8M
Control of B cell development and effector functions by microRNA-142R01AI125615 · NIAID · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI BOLDIN, MARK P · 2016 to 2020
$2.1M
Transcription factor Mohawk in tendon and ligament degeneration and regenerationR01AR065379 · NIAMS · SCRIPPS RESEARCH INSTITUTE, THE · PI ASAHARA, HIROSHI · 2014 to 2018
$2.1M
The role of microRNAs in chondrogenesis and arthritisR56AR050631 · NIAMS · SCRIPPS RESEARCH INSTITUTE, THE · PI ASAHARA, HIROSHI · 2009 to 2009
$475k
NIAID NIH HHS R01 AI125615NIAMS NIH HHS R01 AR050631NIAMS NIH HHS R01 AR065379NIAMS NIH HHS R56 AR050631
6 · The paper itself

Abstract

miRNAs play critical roles in various biological processes by targeting specific mRNAs. Current approaches to identifying miRNA targets are insufficient for elucidation of a miRNA regulatory network. Here, we created a cell-based screening system using a luciferase reporter library composed of 4,891 full-length cDNAs, each of which was integrated into the 3' UTR of a luciferase gene. Using this reporter library system, we conducted a screening for targets of miR-34a, a tumor-suppressor miRNA. We identified both previously characterized and previously uncharacterized targets. miR-34a overexpression in MDA-MB-231 breast cancer cells repressed the expression of these previously unrecognized targets. Among these targets,

Indexed as

Gene LibraryBreast NeoplasmsCell Line, TumorFemaleGene Expression Regulation, NeoplasticGenes, ReporterGlial Cell Line-Derived Neurotrophic Factor ReceptorsHumansMicroRNAsRNA HelicasesTrans-ActivatorsGFRA3 protein, humanGlial Cell Line-Derived Neurotrophic Factor ReceptorsMicroRNAsMIRN34 microRNA, humanRNA HelicasesTrans-ActivatorsUPF1 protein, humanbreast cancermicroRNA target screeningmiR-34areporter library system

Identifiers

PMID28356515
PMCPMC5393199
OpenAlexW2601113264

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.