Evidence map›Paper›PMID 28355541›Full record

ArticleBiophysical journal2017

A Combined NMR and SAXS Analysis of the Partially Folded Cataract-Associated V75D γD-Crystallin.

Matthew J Whitley, Zhaoyong Xi, Jonathan C Bartko, Malene Ringkjøbing Jensen, Martin Blackledge, Angela M Gronenborn

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Matthew J WhitleyDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania.
Zhaoyong XiDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania.
Jonathan C BartkoDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania.
Malene Ringkjøbing JensenInstitut de Biologie Structurale, CEA, CNRS, Université Grenoble Alpes, Grenoble, France.
Martin BlackledgeInstitut de Biologie Structurale, CEA, CNRS, Université Grenoble Alpes, Grenoble, France.
Angela M GronenbornDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania. Electronic address: amg100@pitt.edu.
University of Pittsburgh · USInstitut de Biologie Structurale · FRUniversité Grenoble Alpes · FR

Funding

Conformation and Dynamics of Cataract Mutants of human gammaD crystallinR01EY021193 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GRONENBORN, ANGELA M. · 2011 to 2014
$1.3M
NEI NIH HHS R01 EY021193
6 · The paper itself

Abstract

A cataract is a pathological condition characterized by the clouding of the normally clear eye lens brought about by deposition of crystallin proteins in the lens fiber cells. These protein aggregates reduce visual acuity by scattering or blocking incoming light. Chemical damage to proteins of the crystallin family, accumulated over a lifetime, leads to age-related cataract, whereas inherited mutations are associated with congenital or early-onset cataract. The V75D mutant of γD-crystallin is associated with congenital cataract in mice and was previously shown to un/fold via a partially folded intermediate. Here, we structurally characterized the stable equilibrium urea unfolding intermediate of V75D at the ensemble level using solution NMR and small-angle x-ray scattering. Our data show that, in the intermediate, the C-terminal domain retains a folded conformation that is similar to the native wild-type protein, whereas the N-terminal domain is unfolded and comprises an ensemble of random conformers, without any detectable residual structural propensities.

Indexed as

CataractProtein FoldingScattering, Small AngleX-Ray DiffractionAnimalsgamma-CrystallinsHumansMagnetic Resonance SpectroscopyMiceModels, MolecularProtein Structure, SecondaryProtein Unfoldinggamma-Crystallins

Identifiers

PMID28355541
PMCPMC5376099
OpenAlexW2598795484

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.