Evidence map›Paper›PMID 28355304›Full record

ArticlePloS one2017

Isolation and characterization of the TaSnRK2.10 gene and its association with agronomic traits in wheat (Triticum aestivum L.).

Zhao-Gui Zhang, Guang-de Lv, Bing Li, Jia-Jia Wang, Yan Zhao, Fan-Mei Kong, Ying Guo, Si-Shen Li

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

  1. Pooled it
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  3. Article
  4. Article
  5. Genetic Localization and Homologous Genes Mining for Barley Grain Size.International journal of molecular sciences · 2023
    Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Genetics of yield, abiotic stress tolerance and biofortification in wheat (Triticum aestivum L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Review
  11. Article
  12. Article
  13. A wheat protein kinase gene TaSnRK2.9-5A associated with yield contributing traits.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Zhao-Gui ZhangState Key Laboratory of Crop Biology/Shandong Key Laboratory of Crop Biology, Shandong Agricultural University, Tai'an, China.
Guang-de LvState Key Laboratory of Crop Biology/Shandong Key Laboratory of Crop Biology, Shandong Agricultural University, Tai'an, China.
Bing LiState Key Laboratory of Crop Biology/Shandong Key Laboratory of Crop Biology, Shandong Agricultural University, Tai'an, China.
Jia-Jia WangState Key Laboratory of Crop Biology/Shandong Key Laboratory of Crop Biology, Shandong Agricultural University, Tai'an, China.
Yan ZhaoState Key Laboratory of Crop Biology/Shandong Key Laboratory of Crop Biology, Shandong Agricultural University, Tai'an, China.
Fan-Mei KongState Key Laboratory of Crop Biology/Shandong Key Laboratory of Crop Biology, Shandong Agricultural University, Tai'an, China.
Ying GuoState Key Laboratory of Crop Biology/Shandong Key Laboratory of Crop Biology, Shandong Agricultural University, Tai'an, China.
Si-Shen LiState Key Laboratory of Crop Biology/Shandong Key Laboratory of Crop Biology, Shandong Agricultural University, Tai'an, China.ORCID http://orcid.org/0000-0002-3790-1617
Shandong Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sucrose non-fermenting 1-related protein kinases (SnRKs) comprise a major family of signaling genes in plants and are associated with metabolic regulation, nutrient utilization and stress responses. This gene family has been proposed to be involved in sucrose signaling. In the present study, we cloned three copies of the TaSnRK2.10 gene from bread wheat on chromosomes 4A, 4B and 4D. The coding sequence (CDS) is 1086 bp in length and encodes a protein of 361 amino acids that exhibits functional domains shared with SnRK2s. Based on the haplotypes of TaSnRK2.10-4A (Hap-4A-H and Hap-4A-L), a cleaved amplified polymorphic sequence (CAPS) marker designated TaSnRK2.10-4A-CAPS was developed and mapped between the markers D-1092101 and D-100014232 using a set of recombinant inbred lines (RILs). The TaSnRK2.10-4B alleles (Hap-4B-G and Hap-4B-A) were transformed into allele-specific PCR (AS-PCR) markers TaSnRK2.10-4B-AS1 and TaSnRK2.10-4B-AS2, which were located between the markers D-1281577 and S-1862758. No diversity was found for TaSnRK2.10-4D. An association analysis using a natural population consisting of 128 winter wheat varieties in multiple environments showed that the thousand grain weight (TGW) and spike length (SL) of Hap-4A-H were significantly higher than those of Hap-4A-L, but pant height (PH) was significantly lower.

Indexed as

Genes, PlantChromosome MappingChromosomes, PlantCloning, MolecularCrops, AgriculturalDNA, PlantGenetic Association StudiesHaplotypesPhenotypePlant ProteinsPromoter Regions, GeneticProtein KinasesTriticumDNA, PlantPlant ProteinsProtein Kinases

Identifiers

PMID28355304
PMCPMC5371334
OpenAlexW2598832480

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.