ArticleScientific reports2017
Genome sequencing and analysis of Talaromyces pinophilus provide insights into biotechnological applications.
Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
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Who cites it
21 citing papers in PubMed.
- Draft genome sequence of Talaromyces trachyspermus, a biocontrol fungus isolated from broomrape.G3 (Bethesda, Md.) · 2026Article
- Genome Sequencing and Comparative Genomics of the Hyper-Cellulolytic FungusJournal of fungi (Basel, Switzerland) · 2025Article
- Isolation, Identification, and Analyzing the Biological Characteristics of Pathogens Causing Stem Rot of Lanzhou Onion During Postharvest Storage and Studying the Influence of Pathogen Infection on the Active Components of Lanzhou Onion.Journal of fungi (Basel, Switzerland) · 2024Article
- Genome Characteristics of the Endophytic FungusJournal of fungi (Basel, Switzerland) · 2024Article
- Molecular and biological characterization of a novel partitivirus from Talaromyces pinophilus.Virus research · 2024Article
- Characterization of the complete mitochondrial genome of the medical fungusMitochondrial DNA. Part B, Resources · 2024Article
- Characterization and phylogenetic analysis of theMitochondrial DNA. Part B, Resources · 2024Article
- Three new species ofPeerJ · 2024Article
- Systematic identification of CAZymes and transcription factors in the hypercellulolytic fungus Penicillium funiculosum NCIM1228 involved in lignocellulosic biomass degradation.Biotechnology for biofuels and bioproducts · 2023Article
- Comparison of Fungal Genera Isolated from Cucumber Plants and Rhizosphere Soil by Using Various Cultural Media.Journal of fungi (Basel, Switzerland) · 2023Article
- A New Species and Five New Records ofMycobiology · 2023Article
- Two Subgroups within the GH43_36 α-l-Arabinofuranosidase Subfamily Hydrolyze Arabinosyl from Either Mono-or Disubstituted Xylosyl Units in Wheat Arabinoxylan.International journal of molecular sciences · 2022Article
- Variability in metabolites produced by Talaromyces pinophilus SPJ22 cultured on different substrates.Fungal biology and biotechnology · 2022Article
- Three-Dimensional Genome Map of the Filamentous FungusMicrobiology spectrum · 2022Article
- Solid-state co-culture fermentation of simulated food waste with filamentous fungi for production of bio-pigments.Applied microbiology and biotechnology · 2022Article
- Antiviral Property of the Fungal Metabolite 3-Microorganisms · 2022Article
- Identification of a Novel Transcription Factor TP05746 Involved in Regulating the Production of Plant-Biomass-Degrading Enzymes inFrontiers in microbiology · 2019Article
- Transcription Factor NsdD Regulates the Expression of Genes Involved in Plant Biomass-Degrading Enzymes, Conidiation, and Pigment Biosynthesis in Penicillium oxalicum.Applied and environmental microbiology · 2018Article
- Talarodiolide, a New 12-Membered Macrodiolide, and GC/MS Investigation of Culture Filtrate and Mycelial Extracts ofMolecules (Basel, Switzerland) · 2018Article
- The transcription factor TpRfx1 is an essential regulator of amylase and cellulase gene expression inBiotechnology for biofuels · 2018Article
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7 authors.
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Abstract
Species from the genus Talaromyces produce useful biomass-degrading enzymes and secondary metabolites. However, these enzymes and secondary metabolites are still poorly understood and have not been explored in depth because of a lack of comprehensive genetic information. Here, we report a 36.51-megabase genome assembly of Talaromyces pinophilus strain 1-95, with coverage of nine scaffolds of eight chromosomes with telomeric repeats at their ends and circular mitochondrial DNA. In total, 13,472 protein-coding genes were predicted. Of these, 803 were annotated to encode enzymes that act on carbohydrates, including 39 cellulose-degrading and 24 starch-degrading enzymes. In addition, 68 secondary metabolism gene clusters were identified, mainly including T1 polyketide synthase genes and nonribosomal peptide synthase genes. Comparative genomic analyses revealed that T. pinophilus 1-95 harbors more biomass-degrading enzymes and secondary metabolites than other related filamentous fungi. The prediction of the T. pinophilus 1-95 secretome indicated that approximately 50% of the biomass-degrading enzymes are secreted into the extracellular environment. These results expanded our genetic knowledge of the biomass-degrading enzyme system of T. pinophilus and its biosynthesis of secondary metabolites, facilitating the cultivation of T. pinophilus for high production of useful products.
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