Evidence map›Paper›PMID 28351921›Full record

ArticlemBio2017

CdiA Effectors Use Modular Receptor-Binding Domains To Recognize Target Bacteria.

Zachary C Ruhe, Josephine Y Nguyen, Jing Xiong, Sanna Koskiniemi, Christina M Beck, Basil R Perkins, David A Low, Christopher S Hayes

Abstract read
In one paragraph

Article in mBio, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed.

  1. Article
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  5. Article
  6. Review
  7. Article
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  9. Article
  10. Article
  11. Article
  12. Article
  13. Uncovering the Secretion Systems ofAntibiotics (Basel, Switzerland) · 2023
    Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Antimicrobial Weapons of Pseudomonas aeruginosa.Advances in experimental medicine and biology · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Zachary C RuheDepartment of Molecular, Cellular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, California, USA.
Josephine Y NguyenDepartment of Molecular, Cellular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, California, USA.
Jing XiongDepartment of Molecular, Cellular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, California, USA.
Sanna KoskiniemiDepartment of Molecular, Cellular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, California, USA.
Christina M BeckDepartment of Molecular, Cellular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, California, USA.
Basil R PerkinsDepartment of Molecular, Cellular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, California, USA.
David A LowDepartment of Molecular, Cellular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, California, USA.
Christopher S HayesDepartment of Molecular, Cellular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, California, USA chayes@lifesci.ucsb.edu.

Funding

Molecular Mechanisms of anti-bacterial contact-dependent growth inhibition (CDI)R01GM117930 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI HAYES, CHRISTOPHER S. · 2016 to 2023
$3.0M
NIGMS NIH HHS R01 GM117930
6 · The paper itself

Abstract

Contact-dependent growth inhibition (CDI) systems encode CdiA effectors, which bind to specific receptors on neighboring bacteria and deliver C-terminal toxin domains to suppress target cell growth. Two classes of CdiA effectors that bind distinct cell surface receptors have been identified, but the molecular basis of receptor specificity is not understood. Alignment of BamA-specific CdiA

Indexed as

AntibiosisBacterial Outer Membrane ProteinsBinding SitesEscherichia coliEscherichia coli ProteinsMembrane ProteinsPorinsProtein BindingProtein DomainsReceptors, VirusBacterial Outer Membrane ProteinsBamA protein, E coliCdiA protein, E coliEscherichia coli ProteinsMembrane ProteinsOmpC proteinPorinsReceptors, VirusTsx protein, E colibacterial competitioncell-cell adhesionself/nonself discriminationtoxin immunity proteinstype V secretion system

Identifiers

PMID28351921
PMCPMC5371414

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.