Evidence map›Paper›PMID 28349256›Full record

ArticlePlanta2017

Virus-induced gene silencing of the two squalene synthase isoforms of apple tree (Malus × domestica L.) negatively impacts phytosterol biosynthesis, plastid pigmentation and leaf growth.

Sandra M Navarro Gallón, Carolina Elejalde-Palmett, Dimitri Daudu, Franziska Liesecke, Frédéric Jullien, Nicolas Papon, Thomas Dugé de Bernonville, Vincent Courdavault, Arnaud Lanoue, Audrey Oudin and 8 more

Abstract read
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In one paragraph

Article in Planta, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 3 countries.

Sandra M Navarro GallónEA2106 Biomolécules et Biotechnologies Végétales, Université François Rabelais de Tours, Tours, France.
Carolina Elejalde-PalmettEA2106 Biomolécules et Biotechnologies Végétales, Université François Rabelais de Tours, Tours, France.
Dimitri DauduEA2106 Biomolécules et Biotechnologies Végétales, Université François Rabelais de Tours, Tours, France.
Franziska LieseckeEA2106 Biomolécules et Biotechnologies Végétales, Université François Rabelais de Tours, Tours, France.
Frédéric JullienEA3061 Laboratoire de Biotechnologies Végétales appliquées aux plantes aromatiques et médicinales, Université Jean Monnet de Saint Etienne, Saint Etienne, France.
Nicolas PaponEA3142 Groupe d'Etude des Interactions Hôte-Pathogène, Université d'Angers, Angers, France.
Thomas Dugé de BernonvilleEA2106 Biomolécules et Biotechnologies Végétales, Université François Rabelais de Tours, Tours, France.
Vincent CourdavaultEA2106 Biomolécules et Biotechnologies Végétales, Université François Rabelais de Tours, Tours, France.
Arnaud LanoueEA2106 Biomolécules et Biotechnologies Végétales, Université François Rabelais de Tours, Tours, France.
Audrey OudinEA2106 Biomolécules et Biotechnologies Végétales, Université François Rabelais de Tours, Tours, France.
Gaëlle GlévarecEA2106 Biomolécules et Biotechnologies Végétales, Université François Rabelais de Tours, Tours, France.
Olivier PichonEA2106 Biomolécules et Biotechnologies Végétales, Université François Rabelais de Tours, Tours, France.
Marc ClastreEA2106 Biomolécules et Biotechnologies Végétales, Université François Rabelais de Tours, Tours, France.
Benoit St-PierreEA2106 Biomolécules et Biotechnologies Végétales, Université François Rabelais de Tours, Tours, France.
Lucia AtehortùaLaboratorio de Biotecnologıa, Sede de Investigacion Universitaria, Universidad de Antioquia, Medellin, Colombia.
Nobuyuki YoshikawaPlant Pathology Laboratory, Iwate University, Morioka, Japan.
Nathalie Giglioli-Guivarc'hEA2106 Biomolécules et Biotechnologies Végétales, Université François Rabelais de Tours, Tours, France.
Sébastien BesseauEA2106 Biomolécules et Biotechnologies Végétales, Université François Rabelais de Tours, Tours, France. sebastien.besseau@univ-tours.fr.ORCID http://orcid.org/0000-0002-5518-2580
Université de Tours · FRIwate University · JPLaboratoire de Biotechnologies Végétales Appliquées aux Plantes Aromatiques et Médicinales · FRUniversidad de Antioquia · COUniversité d'Angers · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionThe use of a VIGS approach to silence the newly characterized apple tree SQS isoforms points out the biological function of phytosterols in plastid pigmentation and leaf development. Triterpenoids are beneficial health compounds highly accumulated in apple; however, their metabolic regulation is poorly understood. Squalene synthase (SQS) is a key branch point enzyme involved in both phytosterol and triterpene biosynthesis. In this study, two SQS isoforms were identified in apple tree genome. Both isoforms are located at the endoplasmic reticulum surface and were demonstrated to be functional SQS enzymes using an in vitro activity assay. MdSQS1 and MdSQS2 display specificities in their expression profiles with respect to plant organs and environmental constraints. This indicates a possible preferential involvement of each isoform in phytosterol and/or triterpene metabolic pathways as further argued using RNAseq meta-transcriptomic analyses. Finally, a virus-induced gene silencing (VIGS) approach was used to silence MdSQS1 and MdSQS2. The concomitant down-regulation of both MdSQS isoforms strongly affected phytosterol synthesis without alteration in triterpene accumulation, since triterpene-specific oxidosqualene synthases were found to be up-regulated to compensate metabolic flux reduction. Phytosterol deficiencies in silenced plants clearly disturbed chloroplast pigmentation and led to abnormal development impacting leaf division rather than elongation or differentiation. In conclusion, beyond the characterization of two SQS isoforms in apple tree, this work brings clues for a specific involvement of each isoform in phytosterol and triterpene pathways and emphasizes the biological function of phytosterols in development and chloroplast integrity. Our report also opens the door to metabolism studies in Malus domestica using the apple latent spherical virus-based VIGS method.

Indexed as

Farnesyl-Diphosphate FarnesyltransferaseGene Expression Regulation, PlantGene SilencingMalusPhytosterolsPlant LeavesPlastidsProtein IsoformsSecoviridaeTriterpenesFarnesyl-Diphosphate FarnesyltransferasePhytosterolsProtein IsoformsTriterpenesApple latent spherical virus (ALSV)Apple treePhytosterolSqualene synthaseTriterpeneVIGS

Identifiers

PMID28349256
OpenAlexW2600589170

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.