Evidence map›Paper›PMID 28348875›Full record

ArticleMicrobial genomics2016

Short-term evolution of Shiga toxin-producing

Lauren A Cowley, Timothy J Dallman, Stephen Fitzgerald, Neil Irvine, Paul J Rooney, Sean P McAteer, Martin Day, Neil T Perry, James L Bono, Claire Jenkins and 1 more

Abstract read
In one paragraph

Article in Microbial genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Predicting clinical outcome ofMicrobial genomics · 2025
    Article
  2. Article
  3. Occurrence of MultipleMicroorganisms · 2025
    Article
  4. An outbreak of Shiga toxin-producingEuro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2024
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Genome Sequence Analysis and Characterization of Shiga Toxin 2 Production byFrontiers in cellular and infection microbiology · 2022
    Article
  12. Article
  13. Genome structural variation inMicrobial genomics · 2021
    Article
  14. Comparative Pathogenomics ofInfection and immunity · 2021
    Article
  15. A cluster of Shiga Toxin-producingEpidemiology and infection · 2021
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Lauren A Cowley1​Gastrointestinal Bacterial Reference Unit, 61 Colindale Avenue, Public Health England, NW9 5EQ London, UK.
Timothy J Dallman1​Gastrointestinal Bacterial Reference Unit, 61 Colindale Avenue, Public Health England, NW9 5EQ London, UK.
Stephen Fitzgerald2​Division of Infection and Immunity, The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, EH25 9RG Roslin, UK.
Neil Irvine3​Public Health Agency, 12-22 Linenhall St, BT2 8BS Belfast, Northern Ireland.
Paul J Rooney4​Microbiology Laboratory, Royal Victoria Hospital, BT12 6BA Belfast, Northern Ireland.
Sean P McAteer2​Division of Infection and Immunity, The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, EH25 9RG Roslin, UK.
Martin Day1​Gastrointestinal Bacterial Reference Unit, 61 Colindale Avenue, Public Health England, NW9 5EQ London, UK.
Neil T Perry1​Gastrointestinal Bacterial Reference Unit, 61 Colindale Avenue, Public Health England, NW9 5EQ London, UK.
James L Bono5​U.S. Meat Animal Research Center, Agricultural Research Service, U.S. Department of Agriculture, Clay Center, Nebraska 68933-0166, USA.
Claire Jenkins1​Gastrointestinal Bacterial Reference Unit, 61 Colindale Avenue, Public Health England, NW9 5EQ London, UK.
David L Gally2​Division of Infection and Immunity, The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, EH25 9RG Roslin, UK.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Shiga toxin-producing

Indexed as

Africa, NorthernDisease OutbreaksEscherichia coli InfectionsEscherichia coli O157Evolution, MolecularGenome, BacterialHumansMiddle EastPlasmidsProphagesBioinformaticsEscherichia coliEvolutionProphageRecombination

Identifiers

PMID28348875
PMCPMC5320650

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.