Evidence map›Paper›PMID 28348836›Full record

ArticleMicrobial genomics2016

Evolution of a zoonotic pathogen: investigating prophage diversity in enterohaemorrhagic

Sharif Shaaban, Lauren A Cowley, Sean P McAteer, Claire Jenkins, Timothy J Dallman, James L Bono, David L Gally

Open access · goldAbstract read
In one paragraph

Article in Microbial genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 39 citations in OpenAlex.

  1. Predicting clinical outcome ofMicrobial genomics · 2025
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  7. Article
  8. The Prophage and Us-Shiga Toxin Phages Revisited.Pathogens (Basel, Switzerland) · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Genome structural variation inMicrobial genomics · 2021
    Article
  14. Article
  15. Bacteriophages of Shiga Toxin-ProducingPathogens (Basel, Switzerland) · 2021
    Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Sharif Shaaban1​Division of Infection and Immunity, The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush EH25 9RG, UK.
Lauren A Cowley2​Gastrointestinal Bacterial Reference Unit, 61 Colindale Avenue, Public Health England, London NW9 5EQ, UK.
Sean P McAteer1​Division of Infection and Immunity, The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush EH25 9RG, UK.
Claire Jenkins2​Gastrointestinal Bacterial Reference Unit, 61 Colindale Avenue, Public Health England, London NW9 5EQ, UK.
Timothy J Dallman2​Gastrointestinal Bacterial Reference Unit, 61 Colindale Avenue, Public Health England, London NW9 5EQ, UK.
James L Bono3​U.S. Meat Animal Research Center, Agricultural Research Service, U.S. Department of Agriculture, Clay Center, NE 68933-0166, USA.
David L Gally1​Division of Infection and Immunity, The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush EH25 9RG, UK.
Public Health England · GBUniversity of Edinburgh · GBRoman L. Hruska U.S. Meat Animal Research Center · USRoslin Institute · GB

Funding

Biotechnology and Biological Sciences Research Council BB/J004227/1Wellcome Trust
6 · The paper itself

Abstract

Enterohaemorrhagic

Indexed as

Genetic VariationAnimalsCattleEscherichia coli O157Evolution, MolecularGenome, BacterialHumansProphagesbacteriophageEschrichia coli 0157prophageShiga toxin

Identifiers

PMID28348836
PMCPMC5359411
OpenAlexW2588193147

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.